Scomber japonicus (chub mackerel): 128369081
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Entry
128369081 CDS
T09718
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128369081 (pif1)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128369081 (pif1)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128369081 (pif1)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128369081 (pif1)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
128369081 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
Mg_chelatase
DEAD
RsgA_GTPase
AAA_7
AAA_16
ABC_tran
AAA_5
PhoH
T2SSE
AAA_24
Motif
Other DBs
NCBI-GeneID:
128369081
NCBI-ProteinID:
XP_053186020
LinkDB
All DBs
Position
12:complement(13314415..13325655)
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AA seq
633 aa
AA seq
DB search
MLPGDDGAQLQCCVTVEHLNTSGQATRRQVIRKASVTLGRNEFQEIILRVHDGKVPQSYN
LKDIKLFTKFVRDGKCTVKLLPENIQVLISNCPPDRLNLFLKTLSIKHQAWQGGKPMSDR
EKLKAGLPRSFEAISPLQQKDIQKVNELRSKEPPKGLTERTNKMKASGAGQQVKRSRGDC
NFSPVKSNPSKKPILSLASRKLNKEQTAVLSAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEVSMVEAQFFDKLESVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQARS
WRKVIQVNMELMEVRRQTDQSFISLLQAVRVGRVTEEVTAKLMGSAYHHIEKDGILATRL
CTHKDDVELTNENKLQQLPGSVRVFEALDSDPALVKTIDAQSPVSRLLQLKVGAQVMLTK
NLDVARGLVNGARGVVVAFESGKSGLPRVRFLCGVTEVLKQERWVFKSGGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPSVVRADP
DVLLFYRKLRKERLLMQASMDEFVGSRNKENSW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttacctggagatgacggtgcccagctgcagtgctgtgtgacggtggagcatctcaac
acctccggccaggcaacccgcagacaggtcatccgcaaagcctccgtgactctgggacgg
aacgagttccaggagatcatcctccgggtccacgacggcaaagtcccgcaaagctacaat
ttgaaggacattaaactgttcacaaagtttgtcagagatggaaagtgcaccgtcaaactg
ctccccgaaaacatccaggtgctcatctccaactgcccgcctgacagactgaacctcttc
ctcaaaaccctgagcatcaaacatcaggcctggcagggaggcaaacccatgagcgaccga
gagaagctcaaagccggtctgccccgcagcttcgaggccatcagccccctgcagcaaaaa
gacatccagaaggtgaatgagctcagatccaaagagccccccaaagggctgacagaacgg
accaataagatgaaagcgtcaggagcaggacagcaggtcaaaaggtcaaggggtgactgt
aacttcagccctgtgaaatccaaccctagtaagaagcccatcctgtctctggcctcacgt
aaactgaacaaagaacagactgctgtcctcagtgctgtgctaagcgggaaaaatgtcttc
ttcacaggaagtgcaggtactggaaagtcctttttactcaagagaatcatgggatctctt
cccccaaagagcacttttgccacagccagcacaggtgtggctgcgtgtcatatcggagga
acaacactacacagttttgctggtattggctccggctctgccccgctggagcagtgtatc
gaactggctcagaggcctggggtcctgcagcattggaccagctgtcgacacctcatcatt
gacgaggtctccatggtggaggcccagttctttgacaagctcgagtctgtagccaggtcg
gtgaggaggtctactgaaccatttggcggcatccagctgattgtctgtggtgacttcctc
cagctgcctcctgtctctaagggaaaggaaaaggccagcttctgtttccaggccaggagt
tggcgtaaagtcatccaggtcaacatggagcttatggaagtgcggcgccaaacagaccag
tccttcatctccctcctacaggctgtgagagtgggcagggtgacggaggaagtcactgcg
aagctaatgggaagcgcctaccatcacatcgagaaggacggcattctagcaaccagactg
tgcacacacaaggatgacgtagagctcacaaacgagaacaaactccagcagctgccaggg
tcggtgcgggtatttgaggcccttgacagtgacccagccttggtgaagaccatagacgct
cagagccccgtcagcagactgctccaactcaaagtgggagctcaggtcatgttgacaaag
aacctggatgttgctcgtggtctggtgaatggagcacgaggggttgtggtggcttttgag
tctggaaaatctggactcccacgtgtgcgtttcctgtgtggtgttacagaggtgctgaag
caagagcgctgggtgtttaaatctgggggcgggatccacctgagtcgacagcaactgcca
ctcaaactggcctgggccatctccattcacaagagccagggaatgaccttggactgtgtg
gaaatctctctggcacgtgtgtttgagagtggtcaggcctacgtagccctgtctcgggct
cggagtctggagggtctgagggtcatggactttgaccccagtgtggtgcgagcagaccca
gatgttctactcttttacaggaaactgaggaaggagaggctgctcatgcaggcctccatg
gatgagtttgttggcagcagaaacaaagaaaactcttggtga
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