Scomber japonicus (chub mackerel): 128369102
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Entry
128369102 CDS
T09718
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128369102
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128369102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_6
Homeodomain
zf-C2H2_15
DUF3450
COG3_N
Motif
Other DBs
NCBI-GeneID:
128369102
NCBI-ProteinID:
XP_053186043
LinkDB
All DBs
Position
12:27318700..27394566
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AA seq
1279 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTEFNNGLEASSDSDDEDKLHIVEEDSLQEPEVAAADGTTP
KDSHDDAKTVLPFNGSWNGVKEECVSEEEEGEGVEGEEEGEEEEVVKDALVEEILQQGDT
AVIYPEAPEDEQSPAETGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSE
DNYSCSHCSYTFTYRSQLERHMSHHRGTREQVSQTTGGTGGTRKFKCTECSKAFKYKHHL
KEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVSAAPTNGVTRTSIKIKSPPTTA
TTPVMIAPARVILKEKTESKPLQEQLPVTQIKSEPVEYECKPATAAPATSTGANGVVNGG
TATPAAVQAATLPQGVAMVVPTVGLMSPISINLNDLQNVLKVAMDGNVLRQVMGTANRVV
TQGKQGIVVQQPQQQIISLPAFVDHDGTTKIIINYSISPAAATTATTHPAPFIVKNNPLP
PPTVTSAAAPTPTKTDRPQTPEVADLTIVKAEPEPEPVTVTESEASTQTGKGTVKTSKTS
HTEKAQMPKPNSSSTCLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAG
VTLEEPPVEDLVSLLKTYFASNANPSQEELRKISESVSIPVEVVRKWFVKMNSGKNARKY
RKEAALSKKTEITNSNSEDASNQNGETMQDTKLEESAKVSTESGSASPSSPLSLNTGDLV
IVKSEPEDPEALDSQAEPLDLSLPKHLAALATTRTTPPLKQQEHPLNLTCLRKEQLEGQT
IFVNTPQTGRPVNIVTAAQLPTLVAIAGQGTVGCLSAINTTTKRTILIPQLTYTYATTAG
STTEAKTVVLNGHKPEKRPDSSSDGNSTVEEQHELAIIKKRRLENGVYPCDLCSKVFQKG
SSLLRHKYEHTGKRPHECNICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYS
QHMNHRYSYCKKDGMSAGSGSGPGLFQSELSSPGAGPQSDSRTTTPPSQLDSDERESEEE
EDDDDEAMCMDDIRVVQVDDGECEIYEGNFEEFAGEEEVVVENEPTGEGEEEEEEAAEGE
KADEEEEEEEVVSEVVKVKLVDDQREDEEEMEEITEEMEEITEEMEEITEEMEEITEEME
EITEEMEEITEDMEEITEEKEEITDEKEEITEEKDEITEEKEEITEEKEEITEEKEEITE
EKEEITEEKEEITEEMEEITEEMEEITEEKEEITEEKEDTASEETEETADCEADTDKSIR
EDADSGGGDPTEEAVTDAK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggagcagtgtg
acagaattcaacaatggcttggaggccagctcagactctgatgacgaggacaagctacac
atcgtggaggaggacagtctgcaggagcccgaggtcgccgccgctgatgggaccacaccg
aaggacagccatgacgacgccaaaacagtattacccttcaacggctcctggaacggagtg
aaggaggagtgcgtgtcagaagaagaagaaggagaaggagtagagggagaagaagaagga
gaagaggaggaggtggtgaaggatgccctagtagaggagattctccagcagggagacaca
gccgtcatctatcccgaagctcccgaggacgagcagagtccagcggagacgggaggcgct
gatgaaaacggcaccccagattccttctcccagttgcacacttgcccctactgctcccgg
ggctacaagcgcaacgcctcgctgaaggagcacatcaagtatcgccacgagaccagcgag
gacaactacagctgctcgcactgcagctacaccttcacgtaccgctcgcagctggagagg
cacatgagccaccacaggggcaccagggagcaggtttcccagacgacaggaggaacaggt
ggaacccgaaaattcaagtgtactgaatgttccaaggccttcaaatacaagcatcacctg
aaggagcacctgcgcattcacagcggtgagaaaccatacgaatgctcaaactgcaagaag
cgattctcccactcaggctcctacagctctcacatcagtagtaagaagtgtgtgagtgcg
gcacccacgaacggcgtcacccggacatcgatcaagatcaagtcccctcccaccacggcg
accacacctgtgatgatcgctccagctcgcgtgatattgaaagagaagactgaaagcaaa
ccccttcaagagcagctccccgtcacccagatcaaatctgaacctgtggaatacgagtgc
aagccagcgacggcagcaccggcaacgtcaactggtgccaacggagtggtaaacggaggg
acggcgacgcctgctgcggttcaggctgcaacgctgcctcagggcgtggctatggtcgta
cccacagtcggcctgatgtcacccatcagtatcaatctgaatgacttgcagaatgtgttg
aaggtggccatggatgggaatgtgctcaggcaggtgatgggtacagccaacagggtggtg
acgcaggggaagcagggaatcgtagtccagcagccccagcagcagatcatcagcctgccg
gcctttgtggatcacgatggcaccacaaagatcatcatcaactacagcatcagccctgca
gctgccaccactgccactacccaccctgcaccttttatcgttaaaaacaatcctcttccc
cctcctacggttaccagcgctgcagcccccacccccaccaaaacagatagaccccaaacc
cctgaggtggctgacctcaccattgtcaaggcagagccagagccagaacctgtcacggtg
acggagtcggaggcatccacacagacaggaaaaggaactgttaagacttcaaagacttca
cacactgaaaaagctcagatgccaaaacccaacagctccagtacgtgtttactatgtgat
gactgtcctgacaacctggaggcattgcacctgctccagcatcgcaaagcagccaacggg
gaggctgtcgactccgccgccctcgacccctcattcgccgctctgctaagcgaagcgggg
gtgacgctggaagaaccgcctgtggaagacctcgtctcactcctcaagacgtatttcgcc
tccaacgccaaccccagccaggaggagctgaggaagatctcagagtctgtcagtattccc
gtggaggtggtcagaaagtggtttgttaagatgaactctgggaaaaatgcgagaaaatat
cgcaaagaagcagcgctttccaaaaagactgaaatcacaaattccaattcagaggatgct
tcaaatcagaatggagagacgatgcaggacaccaaactagaggaatctgccaaagtctca
acagaatctggaagtgcttccccttcatcgccactaagcctcaacaccggtgacctcgtc
atcgttaaaagcgaaccagaagacccagaggctctggactcccaggcagagcccctagac
ctctcccttcctaaacaccttgcagcattggcaactacgaggacaacaccccccctcaaa
caacaggaacaccctctgaacctgacctgcctgaggaaggagcagctcgagggtcaaacc
atctttgtgaacacacctcagaccggaagacctgtcaacatcgtcaccgccgcacagctg
cccaccctggtggccatcgctggtcagggcacggtgggctgtctcagcgccatcaacacc
acaacgaagcgaaccatcctcatcccccagctcacttacacctacgctactacggccggc
agcaccactgaagcaaagactgtcgtacttaacggacataagccggagaagagaccggac
agcagctctgatggcaattccacggtggaggagcagcacgagttggctattatcaagaag
cggcggctggaaaacggcgtgtacccctgtgatctttgctctaaggtcttccagaagggc
agctccctgctcaggcacaaatatgaacacacaggaaaacgcccccacgagtgcaacatc
tgcaagaaggccttcaaacacaagcatcacctgatcgaacactcgaggctgcactcgggt
gaaaaaccgtaccagtgcgacaagtgcgggaagcgtttctctcactccggctcttactcc
cagcacatgaaccaccgttactcctactgcaagaaggacgggatgagcgcgggctccggc
tcgggtcctggccttttccagtcggagctcagcagccccggagctggaccgcagtcggac
agccggaccacgaccccgccctcccaactggactcagacgagagggagagcgaggaggaa
gaggacgacgacgacgaggccatgtgcatggacgacatccgggtggtgcaggtggacgac
ggcgagtgcgagatctacgagggtaattttgaggaattcgctggcgaggaagaggtggtg
gtagagaatgagccaacaggagaaggagaagaagaagaagaagaggcagcagagggagag
aaggcggatgaggaagaggaagaggaagaggtcgtttctgaggtggtgaaagtcaaactg
gtggacgaccagcgagaggatgaggaagagatggaggaaataactgaagagatggaggaa
ataaccgaagagatggaggaaataaccgaagagatggaggaaataaccgaagagatggag
gaaataaccgaagagatggaggaaatcaccgaagacatggaggaaataaccgaagagaag
gaggaaataactgacgaaaaagaggaaataactgaagagaaggacgaaataactgaagag
aaggaggaaataactgaagaaaaggaggaaataactgaagagaaggaggaaataactgaa
gagaaggaggaaataaccgaagaaaaggaggaaataaccgaagaaatggaggaaataacc
gaagaaatggaggaaataacagaagaaaaggaggaaattaccgaagaaaaggaggacaca
gcaagtgaagagacagaggagacggcagactgtgaagcagatacggacaaaagcatcagg
gaggacgcggacagcggcggcggcgaccccacagaggaagcggtgacagacgccaaataa
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integrated database retrieval system
