Scomber japonicus (chub mackerel): 128369148
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Entry
128369148 CDS
T09718
Symbol
arhgap21b
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128369148 (arhgap21b)
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Others
Others
128369148 (arhgap21b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
128369148 (arhgap21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128369148
NCBI-ProteinID:
XP_053186111
LinkDB
All DBs
Position
12:18163742..18206598
Genome browser
AA seq
1808 aa
AA seq
DB search
MMASRWVPSCEDDERQQARSSFCENDSPEWRSLADSPAAQYPTEEEFSWPRPKTVHLRRT
SQGFGFTLRHFIVYPPESTTHCFSEEDHGRRGRPRNRLEPMDTIFVKQVKEGGPAHGAGL
CTGDRIVKVNGASIIGKAYCEVISLIQDSGDFLEICVMPKDEDILQLAYSQDAYLRGHSG
YSGNACHIPDPPTVCYPRVDCKPTGMAQATDSVGQVCRGPAAPPDHGYRKEITVPPSPPP
QPYSKSQMAVCMRNDSVRTVVVPPDMAHMGRMGPAHRIDYMDPAFARGRPGSLAQYPHPR
KADVYPGGPGMVPYGGPGPHFPSNHQNIDWRTYQTYREYIDNKGIHSHASRTIQERLDNL
RAASQNNFGATHHIPRGNWGSKGIRRRSTSHERSYQGPPPHFQIAPRSASQDRISGSERM
GQARNWPPRSVSQDGLMHKARAHSMDYVDPAELSRSIEGRGGYARADQGTRPSRQSIPRH
AMVYRPVGYSSGGMRGPPNPSLYTKGPDSLQTRSSPMLSDRASHFGKSTSAEHSITDQRA
FVKGNHTGHATQQGLGRMRAETIQAVETGRDTALAGHRSSSCSTPKLMPKRPMILKPPYP
ESQSQVNGRSSMEAEVVLREKPPSGKNPSPLRHPSYILAVNDDGADSTADVVACWLPNDA
RREIHIRRLGEQHHTSCSSNLDESLDSIPFIDEPVSPSVDREAAPIPPSAVISVAPSITT
GPSSPGSPCPPIRRQLSHDQESLRSALLESETASKTERSKSYDEGLDNYQEEGRGRSSSK
HMPSLRGLRKALDGHKSSVDSGSRRDSSSDVFADSSKEGFLNFRQLNTEKTKRVGGGMRS
WKQMYAVLQGHTLTFYRDRKDALSHASSQSDEDPLRISIKACLIDISYSDTRRKNVLRLT
TSDCKYLFQAEGRDDMLTWIRVIQENSNLDEENAAVTSQDLISRKIKEYNMMSAPSSRSE
PSPKTSRQSLSIKQAFLGKTDSRVHSPHLPKTGEERRALKDDSSPPRDRAAWKMGIAGIM
RKPFEKKTPASGIFGVRLDDCPPAQTNRFVPMIVELCCQVVEERGLEYTGIYRVPGNNAA
ISSLQEELNSKGMADIDLQEDKWRDLNVISSLLKSFFRKLPDPLFTNEKYGDFIEANRTE
DSIERLKELKRLIHELPDHHFETLKFLCAHLKRVSDNCEKNKMEPRNLAIVFGPTLVRTS
EDNMTNMVNHMPDQCKIVENLIQQHDWFFTDDSDEDPVTTAEQESTVQSQPVPNIDHLLS
NIGRTACSPGEVSDSACSDSFKSKQGLWGSGKDQCSKEMLRSSFFVSRKRKKPKDKVHPS
SSDDDLDAAFPKKELPEESQQQSLWSPGSRTEEEGETSEASEKEKHRNSSEEQLNKTNGK
ESLSSSLMSQPSPSLPPQHLSSNLQSGSPYTSPPHSPSLSYRMPMTHQSSLSDPPSNYDD
TVSDLGTMNSTSSQASVPRVRRGRTVAPGPEAGPSGLGAEVCSITSDYSTTSSMTFLTGA
ELSTLSPEVQSVAESRGGDDADDERSELISEGRPMETDSESDLSVFTVGNARAAEQRELQ
EAPRPLPSHRLIECDTLSRKKAAQQKTDSESSLEGTRSDKDSNRLSRVMGSVKGRSTGSL
SSSSRSELDKTEPAWKLKITDRLKVRLRMSVDDMFGVGSQRSRSPEGRSKKKNIRRRHTM
GGQRDFAELSVLGDWQQGGIGSGSRSELSAVDRLKPKCSSQDFSIGDWIARERHRSSNPE
VRLDFSEQQGGLCSTNLGASSSSELPHRPAEVLNGDVPQSKNLSLSATAHPHKLASSQVV
HSRFYQYL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcgcgttgggttccttcttgtgaggatgatgagagacaacaagcacgatct
tctttctgtgagaatgactctccagagtggagaagcttggcggattctcctgcagcgcaa
tacccaacagaggaggagttctcctggccgagacctaaaactgtacatctgcgccgcact
tctcaagggttcggcttcaccctgcggcacttcatcgtttacccaccggagtcaaccaca
cactgcttctcagaggaagatcatggccgcagagggagaccgaggaataggctagagccg
atggacaccatctttgtgaagcaagtcaaagaaggaggccccgctcatggagctgggctt
tgtacaggtgatcgcatagtgaaggtgaatggagccagcattattgggaaagcctattgt
gaggttatatccttgattcaagacagtggcgattttcttgaaatttgtgttatgccaaaa
gatgaggatatactgcaactggcctactcccaggatgcctacctccgtggccacagcggc
tacagtggaaatgcctgtcacattcctgatccacccactgtatgctaccccagagtagac
tgtaagcctacgggtatggcccaggcaacggattcagtggggcaggtttgccgagggcca
gcagcacctccagaccatgggtaccgcaaggagatcaccgtgcctccatccccccctcct
cagccatattcaaaaagccagatggcagtgtgcatgcgcaacgacagcgtgaggactgtg
gtggttcctcctgatatggcccatatggggcgcatgggtcctgcacatagaatagattac
atggaccctgcctttgccagggggaggcctggctcattggcccagtatcctcatcctcga
aaggctgacgtctatccaggtggtccaggaatggttccatatggaggtcccggacctcat
ttcccatccaaccatcaaaatattgattggcgcacttaccaaacgtacagggagtacatt
gacaacaaaggaatccattctcatgctagtcggactatccaggagaggcttgataatctg
cgagctgctagtcaaaacaactttggagcaactcatcacattccccggggaaactggggc
tctaaggggatacgacgaaggagtacatcccatgaacggtcttaccaaggacccccacca
cactttcagattgccccacgcagtgcctcacaggaccgcataagtggttcagagaggatg
ggccaagccaggaactggccacctcgcagtgtgtctcaagatggccttatgcacaaagcc
cgggcacactccatggactatgttgaccctgcagaactgtcacggtccattgaaggaaga
ggaggatatgcaagagcagaccaaggtacgaggcccagcagacagtctatccccagacac
gctatggtctataggcctgttggatacagcagtggcggcatgagggggccacccaatcct
tctctctacactaaaggaccagattctcttcagactcgctcctcacccatgctctcagac
agagcctcacattttggaaagagcacaagtgctgaacattctattactgaccaaagagct
tttgtcaaaggtaaccacacaggacatgctacccaacaaggcctgggcaggatgcgagct
gaaaccatccaggctgttgagactggcagagacacagccttggcaggacacaggtcctct
tcatgctctaccccgaaactgatgcctaagagacctatgatcctcaaaccaccctatcca
gagtctcagagccaggtgaatggacggagctctatggaggccgaggtcgttctaagggaa
aagcccccctctggcaagaaccccagccctctgcggcatccctcctacatcctagctgta
aatgacgacggagcagattccacagcagatgtggtggcatgctggcttcccaatgatgca
cgtcgagaaatacacatacgccgccttggggaacaacatcatacttcctgttccagcaat
ctggatgagtctctggactctattccattcatcgatgagccagtcagccccagtgtcgac
cgggaagcggctcctattccaccttcggctgtgatatctgttgcaccatcaataacgaca
ggtccctccagtccaggctcaccatgccctcccattcgtcgacagctgtcacatgaccaa
gaatccctaagaagtgctttgctggagtctgaaacagccagcaaaacagagcggtccaaa
tcctacgacgagggtctggataactaccaggaggagggaagaggacgttcttccagtaag
catatgcccagtctcaggggtctgaggaaggctctggatggtcataaatcatctgtggat
tcaggatctcgaagggactcctcttcagatgtctttgctgattcgtccaaagagggtttc
cttaactttaggcaacttaatacagaaaaaaccaagcgtgttggtggaggaatgagatca
tggaagcagatgtatgcagttttacaaggtcacaccctgaccttctacagagacaggaaa
gacgccctgtctcatgcttcctcacaatctgacgaggaccctctgcgaatcagtatcaag
gcctgtctgattgacatatcatacagcgatacaagacgcaagaatgtgctgcgactaacc
acctcggattgtaagtacttgttccaggcagaagggcgggacgacatgctgacctggatc
agagtcattcaggaaaacagtaaccttgatgaagagaatgctgctgtaacaagtcaggac
ttgatcagtcgaaagatcaaagagtacaacatgatgagtgcacccagcagcaggtctgaa
ccttcccccaaaacctcccgtcaatccctcagcatcaaacaagcattcctgggtaaaacg
gacagcagggtccacagccctcacttacctaaaacaggagaggagcggagggcactgaaa
gatgactccagtccaccaagggacagagctgcttggaaaatggggattgctgggattatg
aggaagccctttgaaaaaaagactccagctagtggcatatttggagtacggctcgatgac
tgcccacctgcacagactaacaggtttgttcctatgatcgttgagttgtgctgccaagtg
gtggaggaaagaggtcttgagtacacggggatctacagggtcccggggaacaatgctgcc
atctccagcttgcaggaggagctcaacagcaaaggcatggctgacatcgacctccaggaa
gacaaatggcgggaccttaatgtcatcagtagtttactaaagtcctttttccgaaaactt
ccagatcctctgtttacaaatgaaaagtacggcgattttattgaagccaacagaacagaa
gactccattgagagactaaaggagctcaagaggctgatccatgaattacctgatcatcac
tttgaaactctaaaattcctttgtgctcacctgaagagggtttctgacaactgtgaaaag
aacaagatggagcctcgtaacctggcgattgtttttgggccaacgctggtgaggacttct
gaggacaacatgaccaacatggttaatcacatgccggaccagtgcaaaatagttgaaaac
ctcatccaacagcatgactggtttttcacagacgacagtgatgaggaccctgttaccaca
gctgagcaggaaagcacagtgcaatctcagcctgtgcctaatattgaccacttgctctcc
aacatcgggcggactgcatgctcgccgggcgaagtctcagattcagcatgtagtgactcc
ttcaaatcaaagcaggggttgtgggggtcagggaaggatcagtgtagcaaagagatgctg
cgctcctccttcttcgtcagccgcaaacgcaagaagcccaaggacaaagttcatcccagc
agctcagatgatgacctggatgctgcattccccaagaaggagctcccagaggagagccag
cagcagtctttgtggtccccaggtagccggaccgaggaggagggggagaccagtgaagcc
agtgagaaagagaagcaccgtaacagctcagaggaacagctcaacaaaaccaacgggaaa
gagtccctctctagcagcctgatgtcacagccctctccctccctgcctccccaacacctt
tcctccaaccttcagtccggctccccgtacacttcgcctccccattccccaagcctcagc
taccgcatgccgatgactcaccagtcttccctatcagacccgccctccaactatgacgac
acagtgtcagacctcggtacgatgaacagcaccagctctcaggcttcagtgcccagagtg
agacgtggcaggacagtggctccgggaccagaagcgggccccagcgggctgggggcagaa
gtttgctccatcacctccgactactcgaccacatcatccatgacgttcctgaccggagct
gagctcagcaccctcagtcctgaagtgcagtctgtggccgagagcaggggtggagatgat
gcggatgacgagcgtagcgagctcatcagcgagggaaggccaatggagacagacagcgag
agtgatctgtcggtgttcactgtcgggaatgccagagcagcggaacagcgagaactgcag
gaggctccacggcccctcccctcccacagactcatcgaatgcgatacactgtcaagaaag
aaagctgctcaacagaaaactgacagcgagtcttcactggaaggcactcgcagtgacaaa
gattccaacagactgtcacgtgttatggggtcggttaagggtcgctcaactggcagcctc
agctcctcgtctcggagcgagctggataaaacagagccagcgtggaagctgaagatcaca
gaccgactgaaggtacgtctgcgaatgtcagtggatgacatgtttggcgtcggcagccag
aggagccggtcccctgagggccgcagtaagaagaagaacatcagacgcagacacacgatg
ggcgggcagagggattttgccgagctgtctgttttgggagactggcaacagggcggtatt
ggttcaggctctcggtccgagctgtcagccgtggaccggctgaagcccaagtgcagctct
caggacttctccatcggggactggattgcccgtgagcgccatcgcagcagcaaccctgag
gttaggttggacttctctgaacaacagggggggctgtgcagcacaaacctcggagcctcg
tcctcttctgaactgccacatcgtcctgctgaggtgttaaatggggacgttccccaaagt
aaaaatctgagcctttcggccaccgctcacccacataaactcgctagttcccaggtggtc
cattcacgcttctatcagtacctgtga
DBGET
integrated database retrieval system
