Scomber japonicus (chub mackerel): 128369167
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Entry
128369167 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128369167
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Gene silencing
Transposable elements
128369167
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GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
Motif
Other DBs
NCBI-GeneID:
128369167
NCBI-ProteinID:
XP_053186134
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Position
12:complement(2661733..2662981)
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AA seq
336 aa
AA seq
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MACPFLEEPVDIEAQILRRNLRRERIIRPRLDVLSFPDEYLFERFRFSATSIIYLNNILS
PHIVHMTHRGHALSSEQILCIALRFFANGSFLYNIGDAEHVSKATVCRAVRNVTLALKRL
LYMFVVFPGHRPTRLLKEEFHRIAGFPGVIGCIDGTQIPIIAPSMNEGDYVNRRSVHSIN
VQIICDAAHIINNVEAKWPGSVHDSRVFRESTLSAKFARGEFDGYLLGDRGYPCXRYLLT
PYPDPEPGPQQHYNLAHCRTRARVEMSIGMLKARFQCLRRLRVTPERACDIIVACVVLHN
IATIRREQCPTLPLNDIDNNPEPPPLTHEMEEQSET
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtccctttctagaagagccagttgacatcgaggcgcagatactccgccgaaat
ctccgtcgggagaggattattagaccccgattagacgtgttatcatttcctgatgagtat
ctttttgagcgtttccgtttctctgcaacatcaattatttatttaaacaacattctcagc
cctcacatcgttcacatgacacatcgtggacacgctctcagttctgagcaaattctttgc
attgcacttcgtttttttgccaacggcagttttttatacaacatcggtgatgcagagcat
gtctccaaggcaactgtctgtcgggcagtccgaaatgtaacactggcattgaaacggcta
ctgtacatgttcgtagtttttccaggtcacagacccaccagacttctcaaagaagagttc
cacagaattgcagggtttccaggtgtgattggctgcattgatggcactcaaattccgatc
atagctccttcaatgaatgaaggagattatgtgaatcggagatctgtccacagcattaat
gtacagatcatatgtgatgcagcccacataataaataatgtggaagcgaagtggcctggg
tctgtgcatgactcacgagtgtttcgtgagtctacactgagtgccaaatttgcccgtgga
gagttcgatggttacctacttggagacagagggtacccctgctagcgctatttgctgacc
ccttaccctgaccctgagcctggcccacagcaacactacaacttggctcactgcaggaca
cgagccagagtggagatgagcattgggatgctcaaggcccggttccagtgccttcgtagg
ctcagggtcaccccagaaagagcatgtgatattatagtggcatgtgtggtactccacaac
attgccaccattaggagagaacaatgtcctactctcccccttaatgatatagataataat
cctgaaccccccccgctgacgcacgagatggaagagcagtccgagacatga
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