Scomber japonicus (chub mackerel): 128369175
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Entry
128369175 CDS
T09718
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128369175 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128369175 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128369175 (shhb)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C46: hedgehog family
128369175 (shhb)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Morphogens
128369175 (shhb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DrmE_C
VldE
Hom_end_hint
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
128369175
NCBI-ProteinID:
XP_053186141
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Position
12:complement(3722486..3727551)
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AA seq
410 aa
AA seq
DB search
MVLMRMMLSLFLCLLLASVGSGCGPGRGYGKRRPPKKLTPLALKQFIPNVAEKTLGASGK
YEGKISRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQWPGVK
LRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKNKYGMLSRLAVEAGFDWVYYESKAHI
HCSVKAENSVAAKSGGCFPGSAMVILADGRSKPLKELQVGDRVLAADQQGNLLPSDFLMF
MDQDRQIKRQFHVIVTEEPHRKLTLTPAHLVFVLNNNSTDRGDTRAVFASNVKPGQRLLV
VGNDRPGHLIPSTVRQVYVEQHEGSYAPVTSHGTIIVDQVLASCYAVIEDHQLAHWVFAP
VRLWRAFSSLVGMVKELSSVHQADGVHWYPELLYHVGSQLLDSGSFHPQS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatgagaatgatgctgtcgctgttcctctgcctgctgctggcgtccgtcggc
tcgggctgcggaccgggcagaggatacgggaagcggaggccccccaaaaagctgacaccg
ctggctctgaaacaattcatacccaacgtggcggagaaaaccctgggagccagcggcaag
tatgaaggcaagatcagccgcaactcggagaggttcaaagacctgactcccaactacaac
cccgatatcatttttaaagatgaggagaacacgaacgcagaccggctcatgacacaaagg
tgtaaggacaaactgaactctttggctatttccgtcatgaatcagtggcccggggtgaaa
ctccgggtcacagagggctgggatgaggatggccatcactctgaggagtctctgcactac
gagggccgagcagtggatattaccacctcagaccgggataagaacaagtatggcatgctg
tccaggctggctgtggaggctggctttgactgggtttactatgagtccaaagcccacatc
cactgctctgtgaaagcagaaaattctgtggcagctaagtctggaggttgttttccgggt
tctgctatggtgattctggcagatggaaggagtaaaccactgaaggagctccaggtgggg
gacagggtgttagctgctgaccaacaaggaaatctccttcccagtgactttctgatgttc
atggaccaggaccgacagattaaacgacaattccacgtcatagtgaccgaggagccgcac
cgtaaactgacgctgactcctgctcatctcgtctttgttctgaacaacaacagcactgac
agaggtgacaccagggccgtgtttgccagtaatgtaaaaccaggacagcggcttctggtt
gtcgggaacgaccgacccggccacctgatcccctcaacagtgagacaagtttatgtggag
cagcatgaaggctcctacgcacctgtaacatctcatggaaccatcatagtggaccaggtg
ttggcctcctgttatgcagttattgaggatcatcagcttgcacactgggtattcgctcca
gtacgactttggcgtgctttctcgtcactggttggaatggtgaaagagctcagcagtgtg
caccaagctgacggtgtccactggtacccggagctcctctaccacgtgggaagtcagctt
ctggacagcggttcttttcacccacaaagctga
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integrated database retrieval system