Scomber japonicus (chub mackerel): 128369182
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Entry
128369182 CDS
T09718
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128369182 (fubp1)
03041 Spliceosome [BR:
sjo03041
]
128369182 (fubp1)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128369182 (fubp1)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128369182 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
Secretin_N
Motif
Other DBs
NCBI-GeneID:
128369182
NCBI-ProteinID:
XP_053186149
LinkDB
All DBs
Position
12:complement(24298789..24310815)
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AA seq
689 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPQTNEFGYGGQKRPLED
AGGYFPMPNLNTDQPETKKVATSDAFSAMGGMGGPPRSASEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPGRFTYSGGMPDRSVTLTGSPESILTAKRLLTEIVEKGRPAPAFH
HNDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRIS
GEPFKVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGGGGGGDSLDVPVPRFAVGIV
IGRNGEMIKKIQNDTGVRIQFKPDDGSTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGG
PPGHGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIE
LQRNPPPNADPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHG
PPGPPGPPGAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAVADA
NAAAWAAYYAQYSQQPQAPMTPTSGAPGTTQTNGQGDPQAAGQSGQADYSKAWEEYYKKM
GQQSQQPQDYTKAWEEYYKKQGQAAPQATAAAAAAASQPGGQPDYSAAWAEYYRQQAAYY
GTANPQTMGAAPQASQDYRVPAAAAASQT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacagcagcgtggctccgccgtcctctaacgccggtggcggaatgaacgac
gctttcaaagatgctcttcagcgagcacgacagatcgcagcgaagattggtggtgatggc
gttgcagcacctcaaactaatgagtttggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaataccgatcaaccagagacgaagaaagtg
gccacgagtgatgccttttcagcaatgggaggaatgggtggtcccccaaggtcggcatct
gaagaattcaaagttcctgatggcatggttggattcattattggtagaggaggtgaacaa
atatcacgtctgcagcaggagtctgggtgtaaaatacagatcgctcctggtaggtttaca
tacagcggaggaatgcccgataggtcggtgacattaacaggatcgccagaatccatcctg
actgcaaagaggctactaacagagatagttgagaagggacgaccagccccggcgttccac
cacaacgacggcccaggcatgactgttcaggagattatggtccctgcctccaaagccggt
cttgtcatcgggaagggaggcgaaacaatcaaaagccttcaggaaagagccggagtgaaa
atggtcatgatccaagacggaccacaaaacacaggcgcagacaaaccactccgcatttca
ggagagccatttaaagttcagcaagccaaagagatggtgatggagctgatcagagaccag
ggcttcagggagcagaggggcgagtatggttccagggtcggaggaggtggaggcggtgga
ggaggcggaggaggagatagcttagacgttcccgtcccccgttttgcagtaggaattgtt
atcggcagaaacggagagatgatcaagaaaatacagaacgacacaggtgtcaggatccag
tttaaaccagatgacggcagcacacccgacaggatagcacagatcatgggtcctcccgac
caggctcagcacgcggcagaaatcatatccgacctgctgaggagcgtccaggctggagga
cctccaggacacggcggcggcagaggtcgcggtcgtgggcagggcaactggaacatgggg
ccccctggtggcctgcaggagttcaccttcaccgttccaaccatgaagactggcctcatc
atcggaaaaggtggcgaaacaattaagggcatcagccagcagtccggggccaggattgag
ctgcagaggaatcctccccccaacgctgaccccaacatcaaaatgttcacagtgaggggc
tccccgcagcagatcgactacgcccggcagctggtggaggagaaaatcgggggtccagtt
actccaatgggtggcccacatggtccccctggtccacacggaggtccaggcccacatggg
cctccaggaccaccaggacctcccggggcccccatgggtccatacaaccccggaccatac
aaccagggacctccaggacctcatggtcctcccgcgccttaccagcctcaaggatggggc
aatggctacccacactggcagcagggacagcctgatccaaataaagcagtagccgacgcc
aacgcagcggcttgggcggcctactacgctcagtacagccagcagccgcaggctcccatg
accccgaccagcggagctccaggcacaactcaaaccaacggccaaggtgacccacaggct
gcaggtcagagtggacaggcagattactccaaggcctgggaggaatattacaagaaaatg
ggtcaacagagtcagcaacctcaggactacacgaaagcctgggaggagtattataagaaa
caaggtcaagcggcccctcaggccacagcagcagcagcagcggccgcctcccagcctgga
ggtcagccggactacagcgctgcctgggccgagtactaccggcagcaggctgcttactac
ggcacagccaaccctcagacgatgggcgcagcaccccaagcctctcaggattacagggtt
ccagcggctgcagcagcttcacaaacttaa
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integrated database retrieval system
