Scomber japonicus (chub mackerel): 128369243
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Entry
128369243 CDS
T09718
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04217
Necroptosis
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128369243
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128369243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369243
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128369243
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128369243
Multi subunit type E3
LUBAC complex
128369243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
ANCHR-like_BBOX
UBA
Motif
Other DBs
NCBI-GeneID:
128369243
NCBI-ProteinID:
XP_053186222
LinkDB
All DBs
Position
12:complement(3088145..3139334)
Genome browser
AA seq
1093 aa
AA seq
DB search
MPSLSEQLQELRSRAEVCLYSGGRVVEVRTGVMAMANLPLPPCSKYHHITAETMVIENSF
GSNRKETLASLQRFSTALNILEKYGCNLTNPNRPRYWRTVKHNNPVFRATVDAIQGGRAV
LCLYGYSNQQPDGLSFPDDVTDPDVGRVAAVTLEVMSLRMELEMLIKEAHPHPEFYERII
PTLRHKDVGLNTDAVVYHASSFSSTSCRSNGQTKSLAFPLHHHSAKENSHGHSLSSNHQS
LRSIQVFYTSPNKHPENCTICGIFRISVHCLTCLQGLCSECDRLYHSYPERANHRRTAVA
SSSSSLSLSSSSKNRNSQSSSAWHCSHCHKVNYIQDVLCEDCEHPRLEAVSSTADESQPA
TITEWQCKSCTMLNAASSILCEVCERPRLATRPPVTPSHPPITPPRPPAPVLGMPGDPDS
QWVCQFCTYVNYSPAIVCEMCDLARPEPAPLPVKLRPPSPVRRVPALPIKPKEPTPEDLD
SWRQRLMKEEGLKLIQLIRDGEKKGVSPEEVYTSTRVAGDSNILPCKWLKTELPLLLDHI
RMFVATSSLQSISDKTPPEHTGSGNEVVPTKTESVVQLSRAEAKQAWLTAGGDTERAAGQ
ALRDRLTKVKELYSLGFSDEARCHEVLRQSGGDLRGALALLQRPLLEPFHEHIWSDKPEP
PVDIHHPDKQRICRRLLAVYDLPSWGRCELALSLLLEHSAPYSLEDVVQAVRESHDREFI
KRVLAKECPICLSVFPHSKMQSLTSCQCSVCCGCFQQHFTIAIRDKHIRDMVCPVCWEPD
INDPEHLNSYFSTLDIQLRECLEPEVYELFHKKLTEQALIKDPKFLWCCHCSYGFIYDGD
QLKVTCFQCRNSFCAQCKKPWESQHAGLSCEQYQSWKRENDPEYQRQGLAGYLRDNGITC
PNCRFQYALSKGGCMHFCCSQCRYQFCSGCNNPFHTTCAVDECSVSGLHAHHPRDCLFYL
RDWDPSRLQALLQNKGVAYNTDPPPGTQTGLCGVIEQKDEGGQQPDSACGAQTQPGHAGL
CEKHYREYLVSLINNHSLDPAPLYSSNELLLACRRYKVEDTNRDGEDGFTYYSRLLEKLM
DEVPLGDKVPRKK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctatcggagcagctgcaggagttgcggagtcgggctgaagtgtgtctgtac
tctggtggcagggtagtggaggtgcggactggggtgatggccatggctaatctgccctta
ccgccctgctccaaatatcaccatattactgcagagaccatggtcatagaaaacagcttc
ggcagcaacaggaaagagactcttgcatctcttcagcgcttctctacagcactgaacatc
ctggaaaagtatggctgtaacctgacaaatcccaacaggccaaggtactggaggaccgtg
aaacacaacaaccccgtgttcagggccactgttgatgctattcagggaggacgggcagta
ctctgtctctatggttactccaatcagcagcctgatggtctaagtttccctgatgatgtc
acagatcctgatgttggcagagttgctgctgtaacattagaggtgatgagcctgaggatg
gaactagaaatgcttatcaaggaggctcatccccatccggagttctatgagagaatcatt
cctacactgagacacaaggatgtgggtctgaacacagatgctgtggtctaccatgcctcc
tctttctcctctacttcatgtcgctcaaatggtcagaccaagtctttagcctttccactc
caccatcactcggctaaggaaaacagccatggtcattccctgtcctccaaccaccaaagt
ctcaggtctattcaggtcttttacacatccccaaacaaacacccagagaactgcactatc
tgtggaatattccgtatctctgtccactgcctcacttgtctccaaggactgtgttcagaa
tgtgacagactgtaccactcctaccctgagagggccaaccaccgtcgaactgctgttgca
tcatcgtcgtcgtcattgtcattgtcatcatcatccaaaaacaggaacagtcaaagttct
tccgcctggcattgctctcactgccataaagtcaactatatccaggatgtgctgtgtgag
gattgtgagcaccctcgtttggaagcagtcagttctacagcagatgaatctcagcctgcc
accatcactgagtggcagtgtaagagctgcactatgctaaatgcagctagcagtattttg
tgtgaggtgtgtgaaagacctcgcttggcaacacgacctccagttaccccttcacaccct
cccatcacaccacccagaccaccagcacctgtcctgggcatgcctggtgaccctgacagc
cagtgggtgtgtcagttctgtacttatgtgaactactctcctgctattgtgtgtgagatg
tgtgacctggctcgtccagagcctgcacctctgcctgtcaagctccgccctccctcccct
gtcagacgggtccccgccctgccaatcaaacccaaagagcctacccctgaagacttggac
tcctggaggcagaggctgatgaaggaggaggggctgaagctgattcaattgattagggat
ggagagaagaaaggagtcagtccagaggaggtgtacacaagcacgagggtggctggagac
agcaacatcctgccctgcaagtggttaaagacggagctgcctctgctgttagaccacatc
aggatgtttgtggcaacatcttcccttcagtctatatctgacaaaacccctccagagcac
acaggttctgggaatgaggtggtccctaccaaaacagaaagtgtggtccaactgtccaga
gcagaggccaagcaggcatggctgacagcagggggagacactgagagagctgctggacaa
gctctgagagacagactcaccaaggtaaaggagctgtattctctgggcttcagtgatgag
gctcgctgtcatgaggttttgagacagagtggtggagacctgagaggggccctggcccta
ttacagcgcccccttctggagccctttcatgagcacatttggagtgacaagccagagcct
cctgttgacatccatcaccctgacaaacagcgcatatgtcggaggttacttgcggtgtat
gatcttcctagctggggccgctgtgagctggcactgtcactgcttctggagcatagcgcc
ccctactccctggaggatgtagtacaggctgtacgcgagtctcatgatagggagttcatc
aaaagggtgctggctaaagaatgtccaatctgcctctctgtctttcctcatagtaagatg
cagtctctgacttcctgccagtgttcagtgtgttgtggttgtttccagcagcacttcacc
atcgctataagagacaaacacatcagagacatggtgtgtccagtctgctgggagcctgac
atcaatgaccctgaacacctcaacagctacttctccaccctggacatccagctgcgagaa
tgtctggagcctgaagtctatgagctcttccataaaaagctgacggagcaggcccttatc
aaggaccccaagttcctctggtgctgccattgttcatatggcttcatctatgatggagac
cagctgaaagtcacctgttttcagtgtcggaacagtttctgtgctcagtgtaaaaagcct
tgggagtctcagcatgcaggtttgtcttgtgagcagtaccagtcatggaagagagagaat
gatccagagtatcagagacagggcctggctggatacctccgagacaacggcatcacttgt
cctaactgtcgctttcagtatgcactgtctaaaggaggctgcatgcatttctgctgctct
cagtgtcgttaccagttctgcagtggctgcaacaaccctttccatactacctgtgctgtg
gatgagtgcagtgtttctggactacatgcccaccatccaagagattgtctcttctatctg
agagactgggatccgtccagactgcaggctttactgcagaacaaaggagtggcctacaat
actgatcctcctcctggaacacagacaggtctgtgtggagtgatagagcaaaaggatgag
ggaggccaacaaccagactcagcctgtggagctcagactcaacctggacatgccggactc
tgcgagaagcattacagagagtacctggtgagtctgatcaacaaccactccctcgaccct
gctccgctctacagctccaatgagctgctgctggcctgcaggaggtacaaggtggaggac
actaacagggatggagaggatggtttcacctactacagcagactgctggagaaactgatg
gatgaagtaccgcttggtgacaaggtcccacgcaagaagtaa
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