Scomber japonicus (chub mackerel): 128369302
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Entry
128369302 CDS
T09718
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04217
Necroptosis
sjo04620
Toll-like receptor signaling pathway
sjo04621
NOD-like receptor signaling pathway
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128369302 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128369302 (ticam1)
04621 NOD-like receptor signaling pathway
128369302 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128369302 (ticam1)
BRITE hierarchy
Motif
Pfam:
TRIF-NTD
TIR_2
Motif
Other DBs
NCBI-GeneID:
128369302
NCBI-ProteinID:
XP_053186289
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All DBs
Position
12:complement(15855746..15858407)
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AA seq
592 aa
AA seq
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MKLCTSLDNKGRRCWKIAFNCLWYKPKLKMSHKGPENEGTGLRDVCDILVKAPPERLRSL
TFQLRESPEDNIIHALCLIVLQQEEQALNKLQMLTDNNLANHLVETWKMSRGKLEDFAVR
CSNTLEFTRESLATLARIFKVLSEQRLCDQRLRNLAYMRALSTESQKRSNGEDLEYDRLR
EEAKTVCGPSFAEMMLSFSNLKLGSSHDSHSSLNEGSTTLKVTLSQDQSESGLPSPLHAG
SSLPSYPTHLEISTPPTATFHGDKITPQTSGSAEQSPVAPAGNEVKTSPEESKLKSNEPP
LFKDTKMDTAHTMECSKTETPNQTTEPKFSLPTATPKMTETDKMHERKGAEKEEEEIFYA
FVILHAQEDAEVAESLKEKLEDIVSCEGATFSEDFAIPGKSTFRCIEDAIDNSAFTLLLL
TCNFTRLQEVMTDSALINSINHKHKYNTVIPLLPMENRMPNRSMPIVLQRLVPLDEKKNF
DKKARKILSPANINKQKRIWEEEQRVKLEIETQEKLKHLNQHQKQLIQECKRTQLLGQET
LNHITLTHNRHFPCQQQPIINITNSQYVMIGDDSQMTVGHGGGDSIQGDEEQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtgcacctctctcgacaacaaagggagaagatgttggaaaattgcatttaat
tgcttgtggtacaaacccaaactgaaaatgagtcacaagggaccagaaaatgagggaaca
ggactgagagacgtctgtgacattctagtcaaggcacctcccgagcgacttcggagcctg
acattccagctgcgtgagtctcctgaagataatatcatacatgccttgtgtctgattgtt
cttcagcaagaggagcaggccctgaacaaactccagatgctgacagacaacaacctcgct
aaccatctggttgaaacatggaaaatgagtcgaggcaaattagaagattttgcagttcgc
tgcagtaatactctagagttcacaagagagtctcttgcaactttagctcgaatttttaaa
gttttgtcagaacaaagactgtgtgatcaacgtttaagaaatctggcatacatgagagcc
ctttccactgagagccaaaaaagaagcaacggtgaggatctggaatatgatcgactcaga
gaggaagctaaaactgtctgtgggccctcgtttgcagagatgatgctttctttcagcaac
ctcaagttagggtcttcccatgattctcatagcagtctgaatgaaggaagtacaacttta
aaagtgactctgtctcaggatcagtcagaaagtggtttgcccagcccactgcatgcaggc
tcctcactaccatcatatcctactcatctggagataagcactcctccaacagccacattt
catggggacaaaataacgccacaaacatcaggaagcgccgaacaaagccctgtcgccccc
gctggtaatgaggtgaaaacttctcctgaggaatctaagcttaaatccaatgaacctcct
ctgtttaaagacacaaagatggatacagcgcatacaatggagtgcagtaagacagaaact
ccaaaccaaaccactgaaccaaaattttcactacctactgcaacacccaagatgactgaa
acagataagatgcatgaacgtaaaggtgcagaaaaggaggaagaagaaatattttacgct
tttgttatcctgcatgcacaggaagatgcagaagtagccgaaagcttgaaagaaaaactg
gaagatatcgtcagttgcgaaggcgcaactttctctgaggactttgccatccctggaaag
agcacttttaggtgtatagaggatgctatcgacaactcagcttttacccttctgctgctc
acctgcaacttcactcgtttgcaggaggtgatgacagactcggccctcatcaactccata
aaccacaaacacaagtacaacactgttatccctctgctgccaatggagaaccgcatgccc
aaccgtagcatgcccatagttctgcagcgtctagttccactggatgagaaaaagaacttt
gacaaaaaagcacgaaagatattgtcaccagcaaatattaataaacaaaaaagaatttgg
gaggaggagcagagagtgaaattggagatagagacacaggagaaacttaaacatttaaac
caacatcaaaagcagctgatccaagagtgtaaaagaacacagctgcttggacaggaaacg
ctgaaccatataaccctaacccacaaccgccattttccatgtcaacaacaaccaatcatt
aacattacaaattctcagtatgtgatgattggtgatgactctcaaatgactgtgggtcat
ggtggaggtgattcaattcagggagatgaggagcaataa
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