KEGG   Scomber japonicus (chub mackerel): 128369310
Entry
128369310         CDS       T09718                                 
Symbol
wdr47a
Name
(RefSeq) WD repeat-containing protein 47
  KO
K24746  WD repeat-containing protein 47
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sjo04990]
    128369310 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:sjo04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   128369310 (wdr47a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_SCAP TPR1-like_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Vir_act_alpha_C
Other DBs
NCBI-GeneID: 128369310
NCBI-ProteinID: XP_053186299
LinkDB
Position
12:complement(15804513..15816291)
AA seq 915 aa
MTAEETINVKEVELIKVILDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLVLDGQ
WDEVLQFIQPLECMDKFDRKKFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVKC
LHALEEFCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVQCFEDACTMVAEFIPADR
KLSEAGFKASRDRLFQLALKGVLYECCVEFCQSKATGEEITESEVLLGVDMLCGNGCDDL
DLSLLSWMQNLSQSVFSCAFEQKQLNIHVDRLVKPAKTGYADLLTPLISKLSPYPSSPLR
RPQSADTYMSRSLNPALDGLSYGLSGQDKRASGGESAPGKGVSPMSHSFANFHYPGAGGQ
SLSRSLMMESSDCHSIFEESPETSRTETPVDKMMSSGGAQNVRPASAPGEDAPSAGSADR
NELRDSTEKYEEYYRQRLRVQQHLEQKQQQRQMYQQMLLEGGVQQDPPPSDMQHSLTEKF
LNRSIQKLEELNVGMENLGEEVKSLAQQCNGNANTAPSEDNNNSPSVTPEKNSTQGGGVL
SSTPERTVGGRAVPPPNESPVVTESEKKHKEGQQDDSPGSLTRSKEDDKPKSLFVPVHSL
EDTQAVRAVAFHPSGALYAVGSNSKTLRVCAYPETLEARSSPTKQPVVRFKRNKHHKGSI
YCVAWSHCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGPESGG
AILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDLR
VPSCVRVVGTAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDIRGGRIVQVYRPHGSD
VRSVRFSPGAHYLLTGSYDTKVMVTNLQGDLTKQLPLTVVGEHGDKVIQCRWHTQDLSFL
SSSADRTVTLWTHNP
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgacagcggaggaaaccataaacgtgaaggaggtggagctcattaaggtgatcctggac
tttcttaactccaggaagttgcacatcagcatgctggctctggaaaaggaaagtggtgtc
atcaacgggctctactcagacgacatgctcttcctgaggcaactggtgcttgatggccag
tgggatgaggtcctgcaattcatccagcctttggagtgcatggataagtttgacagaaaa
aagtttcgttacattatcctaaagcagaagtttctagaggctctgtgtgtgaacaacgcc
atgtctgcagaggacgaaccacagcacttggagttcaccatgcaggaagcagtcaagtgt
cttcatgcccttgaggagttctgtccctctaaagatgactacagtaaactgtgtctgctc
ctcaccctgcctcgcctcacaaaccatgctgagtttaaggactggaacccaagcacagcc
agagtgcagtgttttgaagatgcctgcaccatggtggcagagttcatccccgcagacagg
aagcttagtgaggccggattcaaagctagcagggatcgacttttccagctggctctcaag
ggagtcctctatgagtgctgtgtggagttctgccagagcaaggcaacaggtgaggagatc
acagagagtgaagttctcctgggtgttgacatgttgtgcggtaacggctgtgatgacctg
gacttgtccctgctctcctggatgcagaacctctcccaaagtgtcttctcctgtgcattc
gaacagaagcaactcaacatccacgtggaccgcctggtcaagccggcaaagaccggttac
gctgacctcctcaccccactcatcagcaaattgtctccgtacccctcctctcccctgcga
cgcccccagtctgctgacacctatatgtcgcgctcattgaatccggcgttggacgggctg
tcttatggcctctctggccaggataagagagcaagcggaggggagagtgcgccaggcaaa
ggggtctctcccatgtctcactcatttgccaacttccactaccctggagctggcgggcag
agcctgagcaggagtctcatgatggagagctccgactgccacagcatctttgaggaatcc
cctgaaacctcaaggacagaaacacctgtggataagatgatgagttcaggtggagctcaa
aacgtgcgtcctgcctcagctccgggagaggatgcaccttcagctggctctgctgacaga
aatgagcttcgggactctacagagaagtatgaggaatattatcgccagcgtcttcgtgtg
cagcagcacttggagcagaaacagcagcagaggcagatgtatcagcagatgttgctggag
ggaggggtgcagcaggaccctccacccagcgacatgcagcacagcctcacagagaagttc
ctcaacaggtccatccagaagctggaggaattaaatgtggggatggagaatttaggagag
gaggtgaagtctctggctcagcagtgcaatggcaacgcgaacacagccccatctgaggac
aataataactctccatctgtgaccccggagaagaacagcacccaagggggaggggtgctc
agcagcaccccagagcgcaccgtgggaggccgcgcagtcccacccccaaacgagtcccct
gtcgtcaccgagagtgagaagaaacacaaagaaggtcaacaagatgactctccaggctcc
ttaacccggagtaaagaggatgacaaaccaaaaagcctgtttgtgccagtgcactctcta
gaagatactcaggctgttcgggccgttgcttttcacccgtctggagcgctctacgctgta
gggtccaactccaaaacgctacgtgtctgtgcttatccagaaacactggaagcaagatca
agtccaacgaagcagccagtcgtccgcttcaagaggaataaacaccacaaaggttccatc
tactgtgtggcctggagccactgtgggcagctgctggcgacaggctctaatgacaaatat
gttaaagtcctacctttcagtgcagagacctgcaacgccacaggcccagacttggagttc
agcatgcatgatggcaccatcagagatttggccttcatggagggtccagaaagcggagga
gccatcttgatcagtgctggagcaggagactgtaacatctacaccaccgactgtcagaga
ggacagggcctgcacgccctcagcggacacacaggtcacattctgtctctttatacgtgg
ggaggctggatgatcgcttctggctcccaagacaagacagtgcgtttctgggacctcaga
gtgcccagctgtgtgcgagtagtgggaactgctttccatggctcaggcagtcctgttgcc
tcggtagcagtcgatcctagcggtcgtctcttagcaacaggacaggaagacagcgcttgc
atgctgtatgacataagaggaggacgcatcgtgcaagtgtatcgaccgcacggcagcgat
gtgcggtctgtcaggttctctcctggagctcactacctgctcaccggctcctacgacaca
aaggtcatggtcaccaacctccaaggtgacttgaccaagcagttgcctctgaccgtggtg
ggagagcacggcgacaaggtgatacagtgtcgatggcacacacaagacctatccttcctc
tcatcctctgccgaccgcactgtcacactttggacacacaatccatga

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