Scomber japonicus (chub mackerel): 128369310
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Entry
128369310 CDS
T09718
Symbol
wdr47a
Name
(RefSeq) WD repeat-containing protein 47
KO
K24746
WD repeat-containing protein 47
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128369310 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
128369310 (wdr47a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
LisH_TPL
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
TPR1-like_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Vir_act_alpha_C
Motif
Other DBs
NCBI-GeneID:
128369310
NCBI-ProteinID:
XP_053186299
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Position
12:complement(15804513..15816291)
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AA seq
915 aa
AA seq
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MTAEETINVKEVELIKVILDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLVLDGQ
WDEVLQFIQPLECMDKFDRKKFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVKC
LHALEEFCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVQCFEDACTMVAEFIPADR
KLSEAGFKASRDRLFQLALKGVLYECCVEFCQSKATGEEITESEVLLGVDMLCGNGCDDL
DLSLLSWMQNLSQSVFSCAFEQKQLNIHVDRLVKPAKTGYADLLTPLISKLSPYPSSPLR
RPQSADTYMSRSLNPALDGLSYGLSGQDKRASGGESAPGKGVSPMSHSFANFHYPGAGGQ
SLSRSLMMESSDCHSIFEESPETSRTETPVDKMMSSGGAQNVRPASAPGEDAPSAGSADR
NELRDSTEKYEEYYRQRLRVQQHLEQKQQQRQMYQQMLLEGGVQQDPPPSDMQHSLTEKF
LNRSIQKLEELNVGMENLGEEVKSLAQQCNGNANTAPSEDNNNSPSVTPEKNSTQGGGVL
SSTPERTVGGRAVPPPNESPVVTESEKKHKEGQQDDSPGSLTRSKEDDKPKSLFVPVHSL
EDTQAVRAVAFHPSGALYAVGSNSKTLRVCAYPETLEARSSPTKQPVVRFKRNKHHKGSI
YCVAWSHCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGPESGG
AILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDLR
VPSCVRVVGTAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDIRGGRIVQVYRPHGSD
VRSVRFSPGAHYLLTGSYDTKVMVTNLQGDLTKQLPLTVVGEHGDKVIQCRWHTQDLSFL
SSSADRTVTLWTHNP
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaggaaaccataaacgtgaaggaggtggagctcattaaggtgatcctggac
tttcttaactccaggaagttgcacatcagcatgctggctctggaaaaggaaagtggtgtc
atcaacgggctctactcagacgacatgctcttcctgaggcaactggtgcttgatggccag
tgggatgaggtcctgcaattcatccagcctttggagtgcatggataagtttgacagaaaa
aagtttcgttacattatcctaaagcagaagtttctagaggctctgtgtgtgaacaacgcc
atgtctgcagaggacgaaccacagcacttggagttcaccatgcaggaagcagtcaagtgt
cttcatgcccttgaggagttctgtccctctaaagatgactacagtaaactgtgtctgctc
ctcaccctgcctcgcctcacaaaccatgctgagtttaaggactggaacccaagcacagcc
agagtgcagtgttttgaagatgcctgcaccatggtggcagagttcatccccgcagacagg
aagcttagtgaggccggattcaaagctagcagggatcgacttttccagctggctctcaag
ggagtcctctatgagtgctgtgtggagttctgccagagcaaggcaacaggtgaggagatc
acagagagtgaagttctcctgggtgttgacatgttgtgcggtaacggctgtgatgacctg
gacttgtccctgctctcctggatgcagaacctctcccaaagtgtcttctcctgtgcattc
gaacagaagcaactcaacatccacgtggaccgcctggtcaagccggcaaagaccggttac
gctgacctcctcaccccactcatcagcaaattgtctccgtacccctcctctcccctgcga
cgcccccagtctgctgacacctatatgtcgcgctcattgaatccggcgttggacgggctg
tcttatggcctctctggccaggataagagagcaagcggaggggagagtgcgccaggcaaa
ggggtctctcccatgtctcactcatttgccaacttccactaccctggagctggcgggcag
agcctgagcaggagtctcatgatggagagctccgactgccacagcatctttgaggaatcc
cctgaaacctcaaggacagaaacacctgtggataagatgatgagttcaggtggagctcaa
aacgtgcgtcctgcctcagctccgggagaggatgcaccttcagctggctctgctgacaga
aatgagcttcgggactctacagagaagtatgaggaatattatcgccagcgtcttcgtgtg
cagcagcacttggagcagaaacagcagcagaggcagatgtatcagcagatgttgctggag
ggaggggtgcagcaggaccctccacccagcgacatgcagcacagcctcacagagaagttc
ctcaacaggtccatccagaagctggaggaattaaatgtggggatggagaatttaggagag
gaggtgaagtctctggctcagcagtgcaatggcaacgcgaacacagccccatctgaggac
aataataactctccatctgtgaccccggagaagaacagcacccaagggggaggggtgctc
agcagcaccccagagcgcaccgtgggaggccgcgcagtcccacccccaaacgagtcccct
gtcgtcaccgagagtgagaagaaacacaaagaaggtcaacaagatgactctccaggctcc
ttaacccggagtaaagaggatgacaaaccaaaaagcctgtttgtgccagtgcactctcta
gaagatactcaggctgttcgggccgttgcttttcacccgtctggagcgctctacgctgta
gggtccaactccaaaacgctacgtgtctgtgcttatccagaaacactggaagcaagatca
agtccaacgaagcagccagtcgtccgcttcaagaggaataaacaccacaaaggttccatc
tactgtgtggcctggagccactgtgggcagctgctggcgacaggctctaatgacaaatat
gttaaagtcctacctttcagtgcagagacctgcaacgccacaggcccagacttggagttc
agcatgcatgatggcaccatcagagatttggccttcatggagggtccagaaagcggagga
gccatcttgatcagtgctggagcaggagactgtaacatctacaccaccgactgtcagaga
ggacagggcctgcacgccctcagcggacacacaggtcacattctgtctctttatacgtgg
ggaggctggatgatcgcttctggctcccaagacaagacagtgcgtttctgggacctcaga
gtgcccagctgtgtgcgagtagtgggaactgctttccatggctcaggcagtcctgttgcc
tcggtagcagtcgatcctagcggtcgtctcttagcaacaggacaggaagacagcgcttgc
atgctgtatgacataagaggaggacgcatcgtgcaagtgtatcgaccgcacggcagcgat
gtgcggtctgtcaggttctctcctggagctcactacctgctcaccggctcctacgacaca
aaggtcatggtcaccaacctccaaggtgacttgaccaagcagttgcctctgaccgtggtg
ggagagcacggcgacaaggtgatacagtgtcgatggcacacacaagacctatccttcctc
tcatcctctgccgaccgcactgtcacactttggacacacaatccatga
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