Scomber japonicus (chub mackerel): 128369315
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Entry
128369315 CDS
T09718
Symbol
riok1
Name
(RefSeq) serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128369315 (riok1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128369315 (riok1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128369315 (riok1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128369315 (riok1)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: Other
RIO family [OT]
128369315 (riok1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Pre-40S particles
Kinases
128369315 (riok1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
YL1
CCD97-like_C
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
128369315
NCBI-ProteinID:
XP_053186310
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Position
12:complement(35790014..35806072)
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AA seq
540 aa
AA seq
DB search
MEPVPGQFDDAEEDSQSEVRAVQSQVCDVTMQDSEEEEEEEEEEDDDDDDEEWAWRASGD
LTKRYNRTSVNSQMNKQNPSNKGLPSSTPSDKALRKYEHKINLDRLNLADSVINKVTTKQ
KQKDADTYRVKDKSDRATVEQVLDPRTRMILFKMLSRGVIAQINGCISTGKEANVYHAST
ASGESRAIKIYKTSILLFKDRDKYVSGEFRFRHGYCKGNPRKMVRTWAEKEMRNLIRLQT
AGIPSPEPLLLRSHVLLMSFIGKENMPAPLLKNAALSESKARELYLQVLQHMRRMFHEAR
LVHADLSEFNMLYHNGDAYIIDVSQSVEHDHPHALEFLRKDCSNVNEFFVKHDVAVMTVR
ELFDFVTDPSITPHNIDQYLEKAMAIAADRTLQQRSDQDGVDEEVFKKAYIPRTLTEVSH
YERDVDLMRTKEEDLAISGHHDNVLYQTLTGLKQDLSGVQRVPALLEDEHSSSSDEEEEE
EEEDEEEQKEEEEEQSEESPMDKKEKKKQVKEAQREKRKTKVPKHVKKRKEKVSKMKKGR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagccggtaccgggacagtttgatgacgcagaggaggacagccaatcagaggtgagg
gctgtgcagagccaggtgtgtgatgtcaccatgcaggacagcgaggaggaggaggaggag
gaggaggaggaggacgatgatgatgatgatgaagagtgggcgtggcgagcatcaggggat
ctgaccaaacgatacaacaggacgtctgtcaacagtcagatgaacaaacagaatccgtcc
aataaggggctgccgtcgtccacgccgtccgacaaagctctgaggaagtacgagcacaag
atcaacctagatcggttgaacctggcggactcggtgatcaataaagtgacgacgaagcag
aagcagaaagacgctgacacgtaccgagtcaaggacaaatcagatcgtgccacggtggaa
caggttttagatcctcgaactcgaatgattctgtttaagatgctgagccgaggcgtcatc
gcccagatcaacggctgcatcagcaccggcaaggaggctaacgtgtaccacgccagcacg
gcgagcggagagagtcgagccataaaaatctacaagacgtcgattcttctgtttaaagac
cgagacaaatacgtcagcggagagttcaggttccgtcatggttactgtaaagggaacccc
aggaagatggtgagaacgtgggccgagaaagagatgaggaacctcatcaggctacagacg
gcggggatcccgagtccagaacctcttcttctcaggagtcacgttctgctgatgagcttc
attggaaaagagaacatgccggctcctctgctgaagaacgcggcgctgtcagagtccaaa
gctcgagaactttatcttcaggttcttcaacacatgaggagaatgttccacgaagctcga
ctcgtccacgctgacctcagcgagttcaacatgctgtatcataacggagacgcttacatc
atcgatgtttctcagtcggtggaacacgatcatcctcacgccctcgagttcctgaggaag
gactgcagcaacgtcaacgagttcttcgtgaagcacgacgtcgccgtcatgacggtccga
gaactcttcgacttcgtcaccgacccgtcgatcacgcctcacaacatcgaccaatacctg
gagaaggcgatggcgatcgccgctgaccgtacgttgcagcagagatcagatcaggacgga
gtggacgaagaggtgtttaagaaggcgtacatccctcgcacgctgactgaggtcagccac
tacgagcgagacgtcgacctgatgaggacgaaggaggaagacttggccatcagtggtcac
cacgacaacgttctgtatcagacgctgaccggactgaagcaggatctatctggagttcag
agggttcccgctctgctggaggacgaacactcttcatcctcagacgaggaagaggaggag
gaggaggaggacgaggaggagcagaaggaggaggaggaggagcagagtgaggaatcgccg
atggacaaaaaggagaagaagaagcaggtgaaagaggctcagagagaaaagaggaaaacc
aaagtcccgaaacacgtgaagaagaggaaggagaaagtgtccaagatgaagaagggccga
tga
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