KEGG   Scomber japonicus (chub mackerel): 128369345
Entry
128369345         CDS       T09718                                 
Name
(RefSeq) nuclear receptor ROR-beta-like
  KO
K08533  RAR-related orphan receptor beta
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sjo03000]
    128369345
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sjo03310]
    128369345
Transcription factors [BR:sjo03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    128369345
Nuclear receptors [BR:sjo03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   128369345
SSDB
Motif
Pfam: zf-C4 Hormone_recep RunxI PA_decarbox
Other DBs
NCBI-GeneID: 128369345
NCBI-ProteinID: XP_053186342
LinkDB
Position
12:15026847..15041006
AA seq 498 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVTSGGGGSTALSLP
REDGVCGGSGEDGEEGLSRSYSSGGSSSTLSDLDDIAALPDLFDLPLTPEEASEYCSLEL
LGGGASTGNTSNSSSSSSTSSSLSNQNSPQQTMLDGADSNGIHSHTHPLLAHTHALLDHL
PDDCSITDLEHITQSIVKSHLETCQYSAEDMKRFTWVQYAPEETRAFQNKSAEWMWQQCA
HHITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNSTIFFNGK
FASAQFFKALGCDDLVSAVFDLGKGLCRLQLSDEEMALFSAAVLLSPDRPWLTEGQKVQK
LQEKVYLALQHSLHKSGASDEKLDKMVSKLPIMKSICNLHIDKLEFFRLVHPETAYSFPP
LYREVFGSEMSLPDSTDS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagagctcaaatcgaggtcatcccctgtaagatctgtggggacaagtcctcgggaatc
cactatggagttatcacctgtgaaggctgcaagggtttcttccgtcgcagccagcagaac
aatgccatgtactcttgttcccgccagaggaactgcctgatcgaccgaacaaaccgtaac
cgctgccagcactgtcgcctacagaagtgtctggctttaggcatgagcagagatgcggtg
aagttcggccgtatgtccaagaagcagcgtgacagcctgtacgctgaggtgcaaaagcac
cagaagtcccaggagtgtgtgacctctgggggcgggggctccactgctctatccttaccc
agggaggatggtgtctgtggtggtagtggggaggatggtgaagagggcctgagccggtcc
tacagcagcgggggctccagctccaccctcagtgacctcgatgacattgccgcactgcct
gacctatttgacctgccgctgacccccgaggaggccagcgagtactgtagcctagagtta
cttggcggaggggccagcactggaaacacctccaactcatcatcttcttcgtccacttcc
tcatccttgtccaatcaaaattcgccgcagcagactatgctggatggggcagacagcaat
ggaatccactctcacacacatccactgctggcacacacacatgcattgctggaccatcta
cctgatgactgctcaataacagaccttgagcacatcactcagagtattgttaaatcgcac
ctggagacgtgtcagtacagcgctgaagacatgaagagattcacttgggtacaatacgca
cctgaggaaacgcgtgcttttcagaacaagtcagctgagtggatgtggcagcagtgtgca
caccacattaccaatgccatccagtacgtggtggagtttgccaaacggattgctggcttt
atggacctatgccagaatgatcagattatactgctgaaagcaggctgtctggaggtcctg
ctgatacgtatgtgtcgagctttcaacgtcaacaacagcaccattttcttcaatggaaaa
ttcgcctcagctcagttcttcaaagcactaggttgtgacgacctggtcagcgcagttttt
gacctgggtaaagggctctgccgtctacagctgtctgatgaagagatggctctctttagc
gcagccgttcttctatcccctgatcgaccctggctgacagaaggccaaaaggttcagaaa
ctgcaggagaaagtctacctggctctgcagcatagcctacataagagcggtgcttctgac
gagaaactagataagatggtgtccaagcttcctataatgaagtctatctgtaacctccac
attgacaaactggagtttttccgtttggtccacccagagaccgcctacagtttccctcca
ctgtaccgggaagtgtttggcagcgagatgtctctgcccgactccaccgacagctag

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