Scomber japonicus (chub mackerel): 128369354
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Entry
128369354 CDS
T09718
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128369354
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Protocadherins
128369354
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
128369354
NCBI-ProteinID:
XP_053186355
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All DBs
Position
12:10557599..10560867
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AA seq
1011 aa
AA seq
DB search
MGETGWNGLLLLMCVSLASLPAVTYAKTVKYQTFEEDAPGTVIGNLAKDISSTPSSSGGS
RTNFRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLIAFDVVSFSKEQFKLIH
VEVEVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGVNYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDN
SPVFDRNSFSVDLPEDAPIGSLLLDLNAEDPDEGLNGEVVYGFGNQVPSEIRQLFRVDRK
TGRLTLESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSI
TAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTNP
LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA
YITTVVARDMDMGSNGKVSYKLADTYFMGSPISTFVSLDPASGSLYALRSFNYEVMKQLE
LRITASDSGSPPLSGSANVFVRIVDQNDNAPAITHPALNNGSAEVLLPRDAPTGYVITRV
EARDADEGVNSELSFGLATGEPSVFSVNKATGEIYLNQVLSHDLDETLSVTVTVSDNGRP
ALTSTATLHFLIIAGSPPSDRTVYQSGVGDEVHAQWDLSVVIIVVLAGSCTLLLLAIILI
ATTCNRRKRDKSGEDSDSYGEKGTLERGRSHVVDNPLLPLHGAGGEAGFEGHSYSSQPGG
FTSAHPGGSDMCSASEDGSEVPCVYDSDSNSKPRGNKHEGYSTLPGYGNGKEAVRPITIW
KGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGAVVPPMGGQNALWACT
SECKVLGHSDRCWSPSAVRANAAPSPAPTLSSFSSLSKTASLPRDPHRRDNYYQAQIPKT
VGLQSVYEKVLHREYDYVLVTPPRPVRVQEISDITIPVYTPTPTHCPNNDI
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacagggtggaacgggttgttgttgctaatgtgcgtctctttggcgagcctg
cctgctgtcacatatgcaaagacggtgaaatatcagacatttgaggaagacgcaccaggg
acagtgatcggaaacttggccaaggacatctcatccactccctcttcatcgggaggctcc
cggaccaatttcaggatgatgaaacagttcaactcctctttcatccgtctgagggagagc
gacggacagctgaccataggagagaggatagacagggagcgcatctgcaaacacaccctg
cactgcctcatcgctttcgacgtggtcagcttctccaaagagcagtttaaactcatccac
gtcgaggtggaggtcaaggacatcaacgacaactcccccgagttcccccggaaagagtcg
agtctggagatctccgagaacacagcggtgggcacgcggatcccgctggactttgccgtg
gatgaggatgttggggtgaactacatccaaagctaccagatctccgtcaacagccacttt
tcaatcgacgtgctcagcagggccgacggggttaaatatgcggagctggtgctcatgaag
gagctggaccgggagacgcaggcttcttacgcgctggagttggtcgctatggacggtggc
aacccgtcccgcaccggaacaacgcgcatcaacgtcaaggtgaaagactacaacgacaac
agtccggtgttcgacaggaacagcttctccgtcgacttgcccgaggacgcaccgataggc
tccctcttgctggacctgaacgcagaggatccggacgaggggttgaacggagaggtggtg
tacgggttcggtaaccaggtgccctcagaaatccggcaactcttcagagtggacagaaag
accgggcgtctcacactggagagtccgattgactttgaaagtaagaacacgtacgaattt
gacgtccaggccaccgacctgggtccgaacccgagcccggccatatgcaaaattgtagtt
caggtgcaggacgttaacgataacgcaccggagatctccatcacccccatgacgtccatc
acggcggggatagcgtacatcacagaggctgcggccagagagagtttcgtggctctggtc
agcacctcggacagagactccggcgctaacggacaggtgcactgcacgctctacggacac
gatcactttagactgcagcaggcgtacgaggacagctttatgattgtgagtaccaacccg
ttagaccgggagaaaatccctgagtataacctcacggtggtggctgaagatctgggctcc
cctcccttcaggaccatcactcagtacaccatccgactgacggacgagaacgacaacgcg
cctgtgttcagtaagccagtgtatgaggtagctgtggtggagaacaatgcacctggcgca
tacatcaccacggtcgtggcgcgggacatggacatggggtcaaacgggaaggtcagctac
aaactagcggacacctacttcatgggctcacctatctccaccttcgtgtcactggaccca
gccagcggttcgctttacgcgctccggagcttcaactatgaggtgatgaaacagctggag
ctccgaatcacggccagcgacagcggctcccctcctctgtccggcagcgcaaatgtgttt
gtgaggatagtggaccagaatgataacgcaccggccatcactcatcccgcgctcaataac
ggctcagctgaagtcctcctgccccgggacgcaccgaccggctacgtcatcacccgggtg
gaggcacgggatgcggacgaaggtgtgaactcggagttgtcctttgggctggccaccggt
gaaccctccgtgttctctgttaacaaagccacgggggagatctacctcaaccaggtgctc
agccacgacttggacgaaaccctgagcgtgaccgtcacggtgagcgacaacgggaggccc
gcgctcacctccaccgccaccctccacttcctcatcatcgcgggctccccgccgagcgac
aggacagtgtaccagtcaggcgttggagacgaggtacacgcgcagtgggacctgtcggtg
gtgattatcgttgtcctcgcggggagctgcacgctcctgctgctcgccatcatcctcatc
gccaccacctgcaaccggcgcaaacgggacaaaagcggagaagacagcgactcatacgga
gagaagggcacactggaacggggcaggagccacgtggtggacaacccgcttctgcctctc
cacggggccgggggagaagcaggctttgagggacactcctacagcagtcagcccggtggg
ttcacctcagctcaccctgggggcagcgacatgtgctcggcctcagaggacggcagcgag
gtgccctgcgtgtatgactcagacagcaacagcaagcccagagggaataaacacgagggc
tactccactctgcctggctatggaaacggcaaagaggctgtgaggcccatcaccatctgg
aagggcaactcatacaccaccatctctgccagggacccggccttcagtggcaaagacagt
ggcaagggggacagtgacttcaatgacagtgacagtgatgtgagtggagacactggcctg
aagaaagatggagcagtggttcctcccatgggcggccaaaatgctctgtgggcttgcacc
agtgagtgtaaggtcttaggtcactcagatcgctgctggagcccttcagcagtaagagcc
aacgcagcaccctccccagccccgaccctctcatccttcagtagcctctccaagacggcc
tccctgcctagggacccccatcgcagagacaactactaccaggcccaaatccccaaaaca
gtggggctgcagagcgtgtacgagaaagtgctgcaccgagagtacgactacgtcctggtc
acccctcccaggcctgtgagggtccaggagatcagtgatataaccatccctgtttacaca
cccaccccgacacactgtcccaacaatgacatttaa
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