Scomber japonicus (chub mackerel): 128369356
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Entry
128369356 CDS
T09718
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128369356
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
Patched domain-containing proteins
128369356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
NPC1_MLD
ACR_tran
Motif
Other DBs
NCBI-GeneID:
128369356
NCBI-ProteinID:
XP_053186357
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All DBs
Position
12:complement(10891218..10894036)
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AA seq
833 aa
AA seq
DB search
MMRYHTNCIERPLRLCFEMMGAFIGSHPWLFLTAPLILSTCLGSGFYFLKDRMSNNIEEQ
FTPVDGQAKMERKYIQETFPGNDSMFSSLRMNTDGNYATLIATSDRNILTVESLQDILDL
DLKIRRMVVQFDNQSFEYVDVCAEVMGSCTSNDILDIIEYNANNIDIVNLTFPWYHYDLR
SIPLYLSLGSVKLNKEVVESAKAIQLHYYLREDNKTKIDLWLESVINLVSNESSSSIQVS
YSTSMSMQWEFEKSPSSVISLFSITYAIAIAFSIISCWRLDNVRTKVWVASCGVLSTGLA
VLSGFGAMLLLGQPFVMTVASCPFMILGIGLDDMFIMISCWQRTRVLDSVPERLADTYRD
AAISISITTLTDALAFFLGAISPFGSVQSFCLYAGISVCFCYLYSITFLGACMALNGRRE
AENKHWFTCAKILEDSPPTDSKSSSMCCAGGSYDRVTEKEETEPMSQIFERFYGPFLTHK
LIKACVFVIYASYLAVSVYGCFTLKEGLDRKNLALDDSYISTYYNTQRQHFSEYSSNVMV
AVTQPFPYWDEDEQKHLLSCMSNFENLNYVNYTFGWLPSFQQYANATNRSIYSQEAFQTH
LPHFLELNSMFRQDISWSADNQIQASRFFIQTLNKTQMKDMMRGLRETAEECPVELLVYH
PAFIYFDQYTVIMDNTIRTILMAVIVMLVVSLILIPSPLCSVWVAFAICSVTVGVTGFMS
LWGVHLDSISMINLVMCIGFSVDFSAHISYSFVSSPKSDVNGKAMDALAHLGYPMVQGAL
STVLGVVVLSMSGSYIFRTFFKIVFLVITFGLLHGLVFIPVFLTIFAACWKWC
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgatgagataccatacaaactgcatagagagacctttacgcctctgttttgagatgatg
ggcgcctttattggatctcatccctggttgttcctgactgccccacttattctgtcaaca
tgtttggggagcgggttttattttctcaaggacaggatgtccaacaatattgaagagcag
ttcacaccagttgatggacaagccaagatggagaggaaatacatccaagaaacatttcca
ggaaatgattccatgttttccagtttgaggatgaacacagatgggaattatgcaacactt
atagctacaagtgacaggaatattctgacagtggagtcacttcaggacatcttagatttg
gaccttaaaattaggagaatggtagtgcagtttgacaaccagtcatttgaatatgtagat
gtttgtgcagaagtgatgggctcctgcacttctaatgacattctagatattattgaatac
aacgccaataatatagacattgtcaatttgacttttccgtggtatcactatgaccttagg
agtattcccttatatttaagtttggggagtgtcaaattgaataaagaggttgttgaaagt
gctaaagccatacagctccattactacttacgagaggacaacaaaacaaaaatagactta
tggttggaaagtgtcataaatttggtctcaaatgaatcatcatcttccattcaggtgtca
tactccacttccatgtcgatgcagtgggaatttgagaaatctccatcttcagtcatcagt
ttattttccatcacctacgccattgctattgcattttcaattatttcatgctggaggttg
gataatgtgaggacgaaggtgtgggtggcgtcctgtggggtgctctcaacaggtctagca
gtcctgagtggttttggtgcgatgttgttgcttggccaaccttttgtcatgacagttgcc
tcctgtcctttcatgatattaggtattggacttgatgacatgttcatcatgatctcctgc
tggcagaggacccgagtcctggatagtgttcccgaaaggctggctgacacctacagggat
gctgccatctccatttccatcaccaccctgactgatgctctagctttcttcctcggcgcc
atctcgccctttggctcagtccagtccttctgcctctacgctgggatctctgtttgcttc
tgctatttgtacagcatcactttcctgggggcttgcatggctttgaacggacggagggaa
gctgagaacaagcactggttcacatgtgccaaaatcctggaagattcaccacccacggat
tcaaaaagctccagtatgtgttgtgctggagggagctatgatcgagtcactgaaaaggag
gaaacggagcccatgagtcaaatctttgagcggttctatggcccatttctcacccacaaa
ctgattaaagcatgtgtgtttgtaatctatgctagttatctggctgttagtgtatatggt
tgttttaccttgaaggagggactcgatagaaaaaatctggctctggatgattcctacatc
agtacttactacaacactcaaaggcaacacttttctgaatatagctctaatgtgatggtg
gcagtgacgcagcccttcccctactgggatgaggatgagcagaagcatctcttatcatgc
atgtcaaatttcgaaaacttgaattatgtaaattacacttttggttggttgccgtccttt
cagcagtatgcaaatgcaaccaatcgtagcatatattcgcaagaggctttccaaacccat
ctgccccattttttggaacttaactccatgttcaggcaggacatcagctggagcgcggac
aatcagattcaggcctctcgcttctttattcagacactgaacaaaactcagatgaaagac
atgatgagaggactcagggaaacagcagaggagtgtccagttgagcttctggtgtatcac
cctgcttttatctactttgaccagtatactgtgatcatggacaacaccattcgaaccatt
ctgatggctgtgattgttatgctagttgtctcactcatcctgatacccagccccctttgt
tcagtatgggtggcttttgcaatttgttcagtcactgttggcgtgacagggttcatgtct
ctgtggggtgttcacctggactccatttctatgatcaacctggtcatgtgcattggtttc
tctgtggacttctcagcacatatttcttactcgtttgtctctagccccaagagtgatgtc
aacgggaaagccatggatgccctggcccatttaggatatccaatggtgcaaggagcattg
tccactgttttaggagtggtggtgctgtccatgtcggggagttatatatttaggactttc
ttcaagattgtgttccttgtgattactttcgggctgcttcatggcttggtgtttattcca
gtatttttgactatatttgcagcctgttggaagtggtgttaa
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