Scomber japonicus (chub mackerel): 128369358
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Entry
128369358 CDS
T09718
Symbol
yme1l1b
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1b
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128369358 (yme1l1b)
Peptidases and inhibitors [BR:
sjo01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
128369358 (yme1l1b)
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Paralog
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
TIP49
RuvB_N
AAA_22
DUF815
AAA_lid_PRS2_C
Mg_chelatase
AAA_7
AAA_14
nSTAND3
AAA_33
IstB_IS21
FAD-SLDH
AAA_17
PhoH
AAA_28
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-GeneID:
128369358
NCBI-ProteinID:
XP_053186361
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All DBs
Position
12:10882762..10890978
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AA seq
720 aa
AA seq
DB search
MFSLTMTVQPQVTVPLSHLLNVLHSLKSSVGSSSSATSKSRIHKEHASDPELHCSEPMLN
LRELGLSDLGAQQLDDLVSHVLPRFSPQEASLPYGIGGQTAWRTSHLSTSSFFHNKHGFS
CGSMSAPVFSRQHPFPLQSFSTEPHYSVWVQSRGFKTLRNKTRRLQSSFDRPVESEGFTP
SFMKGFLTRDKGIEVENLDSILKNKNIPDGQQDSFKRGFAEGFLKAQALTQRTQDSLRRT
RLILLVLLLVGLYGISKTPFISVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKNELQE
VVEFLKNPQKFTALGGKLPKGVLLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV
GVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPN
EGVIIIGATNFPEALDNALIRPGRFDMQVTVPKPDVKGRTEILNWYLKKIKVDPAIEANI
IARGTVGFSGADLENLVNQAALKAAVDGKDMVSMKELEFAKDKILMGPERRSAEIDKKNK
LITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHVSMLPENDRWSETRSQLLAQMDV
SMGGRVAEEIIFGREYITTGASNDFDSATKIAKMMVTRFGMCEKLGVMTYADLTQQSPET
QAAVEHEVRLLLKDSYERAKALLKSHAKEHKSLADALLMYETLDAKEIQLVLEGKNLESR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgacaatgaccgtacaaccacaggtgactgtacccctaagtcacctcctc
aacgtcctccactctctgaagagttcagtggggagcagcagcagtgccaccagcaaatca
agaatacacaaggagcatgcctcagacccagaactacactgctcagagccgatgctgaat
ctgcgggagcttggcttatcagacctgggagcacagcagctggatgacttggtgagccat
gtgttaccacgtttcagcccacaggaggcatcacttccatatggtatcggtggtcaaaca
gcctggaggacttctcatctctctacatcctcctttttccacaacaagcatgggttctca
tgtggttccatgtcagccccagttttttccaggcagcacccctttccccttcagtctttc
agcacagagcctcactattcagtctgggtccagagcagaggctttaagactttaaggaac
aaaaccagaagactacagtcatcctttgaccgcccagtagaatctgaagggtttacacca
tctttcatgaagggtttcctgacacgtgacaaggggattgaagtggaaaatctagacagc
atattgaaaaacaaaaacatacctgatgggcagcaggactcttttaagaggggcttcgct
gaaggtttcctgaaagctcaagccctgacacaacgcacgcaagactctttgagaaggact
cgtctcatcttgcttgtgctgctccttgttgggctctatggtatctcaaagacccccttc
atatcggtgcggttccgaaccacatcaggcctggactctgcagtggatcctgtccagatg
aaaaacgtgacatttgagcacgtgaaaggtgtagaggaagctaagaatgagctgcaggaa
gtggtggagttcctgaaaaacccacagaagttcacagcccttggaggaaagctgccaaaa
ggcgttctactggttggccctccagggactggtaagaccctactagctagggcggtggca
ggagaggcagatgtgccattctactacgcctccgggtcagagtttgatgagatgtttgtt
ggagtgggagccagccgcattaggaacctttttagggaggctaaaggtaatgctccctgc
gtgatctttattgatgaactggacagtgttggtggaaaaaggattgagtctcccatgcac
ccttactctagacagaccatcaatcaactacttgctgagatggatggatttaaaccaaat
gaaggcgtgatcatcatcggagccaccaacttcccagaggctttggataatgcactgatc
cgcccgggacgttttgacatgcaggtgactgtccccaaaccagacgtgaaaggacgcacg
gagatcctcaactggtacctgaagaagattaaagtggatccagctattgaggccaatatc
attgcccggggcacggtgggattctccggcgctgacctggaaaatctggtaaaccaggct
gccctgaaggcggcagtcgatggtaaagacatggtctccatgaaggagctggagtttgct
aaagacaaaatcctaatgggccctgagaggaggagtgctgaaatagacaagaagaacaag
cttatcacagcataccatgaatcaggtcatgccattgtagcttactacaccaaagacgcc
atgccaatcaacaaagccactatcatgcccagggggccgagtctgggacatgtgtccatg
ctcccggagaatgatcgctggagtgagactcgctctcagctgctggcccagatggacgtc
agtatgggcggccgtgttgcagaggagatcatattcggtcgtgaatacatcacaacagga
gcatcaaacgactttgatagtgccaccaagatcgctaagatgatggtgaccagatttgga
atgtgtgaaaagttgggtgtgatgacctacgctgacctgacgcagcagagcccagagacg
caagcagctgtggagcatgaagtcaggttgttattgaaggactcttatgagcgtgccaaa
gccctcctgaagtctcatgccaaggagcacaagagccttgcagacgcactgctcatgtat
gagactctggatgccaaagagatccagctggtcttggagggcaagaacctggagagcaga
tga
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