Scomber japonicus (chub mackerel): 128369518
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Entry
128369518 CDS
T09718
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128369518 (kcnn1a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128369518 (kcnn1a)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DUF6775
NPHP3_N
TMEM70
Motif
Other DBs
NCBI-GeneID:
128369518
NCBI-ProteinID:
XP_053186544
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Position
12:complement(13536098..13580704)
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AA seq
553 aa
AA seq
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MNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKA
SNESLVREGSGNGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTE
TELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYE
RIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRV
MLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVC
ERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAV
VARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQ
RKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLED
KLDSVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASERSERSERSWTSTARRRR
SPSTAPHTSSDSG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcaagtataatggcggagtggtgagaccactagtgggcagtctggcgtcc
tcgtctcgccgcaaccttgcggagctcgactcggagacgcagcccttgcagacgctgcac
agctctggcctggaggtggtggtgtccaagggcaacggcggcgaagatcctagcaaggcg
tccaacgagagcttggtcagggagggcagcgggaatggcggaggcagggcgccgcagaag
aagaacagggacattggctacaagcttggccaccggagggcactgtttgagaagcggaag
cggctcagcgactacgcactcatcttcgggatgtttgggattgttgtcatggtgacagag
acggaactgtcatggggggtttacactaaggaatcttcatactcatttgcactgaaatgc
cttatcagcctttccactgttatattgcttggtcttataataatgtaccatgcccgggaa
atccagttatttatggtggacaatggtgcggacgattggaggatagccatgacgtatgag
cggatcttcttcatcgtgctggagctgctggtgtgtgccatccatcccatcccgggccag
tacgtcttcacctggacggcgcggctggcctttacatatacgccgtcggtggccgatgcc
gacgtggacatcatcctctccatccccatgttcctgagactctacctgatcggcagggtc
atgttacttcacagcaagctattcacggacgcttcctctcgcagcattggcgccctcaac
aagatcaacttcaacacacgctttgtcatgaagaccctcatgaccatctgtccaggaact
gttctgctggtgttcagtatatcctcctggatcattgctgcatggactgtgcgcgtctgt
gagaggtatcacgacaaacaggaagtcaccagtaactttctgggagccatgtggctcatc
tcgattaccttcctctccattggctacggggacatggtaccacacacgtactgtgggaaa
ggcgtgtgtctgcttacagggattatgggagctggctgcactgcgctggtggttgcagtg
gtagccaggaagctggagctgaccaaggctgagaagcatgtccacaacttcatgatggac
acacaactctgcaaacgagtgaagaacacagctgccaatgtactcagggaaacatggctc
atctacaaacacaccaagttggtcaagaagatagatcatgccaaggtgcggaaacaccag
cgcaagtttctccaagccattcaccaactgcgcagtgtgaagatggaacagaggaaactc
aatgatcaggccaatactttggtggacctggcaaagacccagaatgtgatgtatgacctg
gtgtcagagctgcaggagcgcagtgaggagctggacaagcgcatcggcacattggaggac
aagctggactcggtgacgggcagcctgcaggcgctgccctgcctcatctcccaagccata
acccagcagcagcaggacttcctggacggctttgttcaccgctttcggcctgcctcacta
gcctcagagcgctctgaacgctctgagcgatcctggacttccactgctcgcaggcggcgc
tcaccctccacagctccacacacctcctctgatagcggataa
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