Scomber japonicus (chub mackerel): 128369528
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Entry
128369528 CDS
T09718
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a
KO
K21066
A-kinase anchor protein 18
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128369528 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128369528 (arhgef18a)
Membrane trafficking [BR:
sjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128369528 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
Motif
Other DBs
NCBI-GeneID:
128369528
NCBI-ProteinID:
XP_053186569
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All DBs
Position
12:21762130..21780363
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AA seq
967 aa
AA seq
DB search
MDEIDGLRFRPFSEDSVSLAESINLEDAHYAQLREELESDAQNLEAESWSVAVDQNYSKA
LTKEAVKRQDVIYELIQTEMNHVRTLKILLFVYMHKLKQSLLIEEAKLERLFPTVDALLT
LHQHFLNCLKLRQNQSQEEGSPNSYQILQLGDILISQFSGGLGERMKDWYGVFCSHHSES
ISSYKEQLQNNKKLQSLIRKIGQLPLVRRLGIPECFLLVTQRITKYPVLVERIIQNTEAD
TDEHKSLVQGLALIKDTISQVNDQVCEYEKLARLREICLRLDPKSHGRLKDGRQFRREDL
VQCNRTLLFEGTVTWKTSVRQKDVHAVLLSDVLLLLQEKDQKLVFAAVDNKPPVISLQRL
IVREVAHEDKAMFLICACTTTMPEMYEIHTGSREECISLMALIRDAVNSCPEEEEELYSE
QTARLQGYQDLLKEKDDQIKQSLTEKLQVFVSLYEEGQGQETAPRGLLLRGDATDLQQGA
TLLKGAIDEVENLQSLLLLRIRDPNPSLNENKTQGEKLRRAETFGVADNNFTATTMKNGD
AAERLGGSECSSVYGGHNTNDPQLLEMHYSESQEQSADEDKEMPNCNPTSGYVPEAEVCD
RVILLAQRLYSLQAIIAQQDSQIELHRTFQLKNKPARPHSNVLFEQEKQRNLEKQKEELA
NLHKLQAQHREEQQRWEKERDRQSIQIERLEAQLKEREEECRKWEEKLNEEKAELGRQQE
TYQQNLERLRESTKLVEKEGERVSQEKDRLEQQQEKIKKYMSHISQAQANYDDPTHYPGL
SSYQSFRGSIINGGRTLTPKTLVLPSIQSDPEETPPKVPPRKESISPLPVKPELPVHLIS
TTNQDYKPAPVQQKIPTKLATLSKGKEKVKTKGSHQRTHSAASIDVNQVLPIRVTGKEGG
SLRATRTASPQRIYQSDAFKPPGSAHSVKMSQSFSTHKRSNSDAPPPPPPPFPKEILKTG
KEKVIFL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggatgagatcgacggcctgcggtttaggcccttctctgaggactctgtgtcgctggct
gagtccatcaacctcgaagatgcccattatgctcagctgcgagaagagctagagtctgac
gcgcagaacctggaggcggagtcctggagcgtcgccgtggaccagaactactcgaaggct
ttgactaaagaggctgttaaaagacaggatgtaatttatgagttgatccagacggagatg
aaccatgtacgtaccttaaaaatccttctcttcgtctacatgcacaagctgaagcaatct
ctgctgatagaggaagccaaactggagcggcttttccctacagtggatgccctgctcact
ctccatcagcacttcctcaactgcctcaaactacggcagaaccaaagccaggaggaagga
agcccaaacagctaccagattttacagctgggggatattctcatctctcagttttcagga
gggctgggagaaaggatgaaggactggtatggtgttttctgcagccatcacagcgagtcc
atcagctcctacaaagagcagctacagaacaataagaagctgcagagcctcattaggaaa
ataggtcagctgccacttgtgagacggttggggatccctgagtgttttctgttagtgaca
caacgcatcacaaaatatcctgtcttggtggaacgaatcattcagaacactgaagctgac
acagacgagcacaagtctctggtacaaggtttagcgctgatcaaagacaccatctcccag
gtgaacgatcaggtctgtgaatatgagaaattggctcgtctgagagagatctgcctgcgt
ctagacccgaaatctcatggccggctgaaggatggccggcagttccgcagggaggatctc
gttcagtgcaacaggacgctgctgttcgaaggcaccgtcacctggaagacgtctgttaga
cagaaagatgtccatgctgtgctgctgtcagacgtgctcctactgttacaagagaaagat
cagaagcttgtgtttgctgctgtggataacaaaccaccagtgatctcccttcaaagactg
atagttagggaagtggcccatgaggacaaagctatgttcctcatctgtgcgtgtaccaca
actatgccagagatgtacgagatccacaccggctccagagaggaatgtatctccttgatg
gccctcatacgagacgcagtgaacagctgtccagaagaggaggaggagctgtacagcgaa
cagactgccagactgcaggggtatcaagaccttcttaaggagaaggatgaccagataaag
cagagcctcacagagaagctgcaggtctttgtttcactttatgaggaagggcaagggcag
gaaacagcccccagggggctgctgctccgaggcgatgccactgacctccagcagggggcg
acactgctcaaaggagccatcgatgaggtggaaaacctgcaaagcctgctgctcttaaga
ataagagacccaaacccttctctgaatgagaataagacacagggggagaagctaaggaga
gctgagacatttggcgtcgctgacaataacttcacagcaaccaccatgaaaaatggagat
gcagctgagaggctcggtggcagcgagtgcagctcagtgtatggcggtcacaacactaat
gatcctcagctcctggaaatgcactactctgagagccaggagcagtctgctgatgaagac
aaagagatgccaaactgcaatccaacatctggatatgtccctgaggcagaggtgtgtgac
agggtgatactactcgcacagaggctgtacagcttacaagccatcatcgcccagcaggac
agccagattgagctgcatcgcactttccagttaaaaaacaagccagcccgtccgcacagc
aacgtgctgtttgaacaggagaagcagcgcaacctggagaagcaaaaggaggagctcgcc
aacttgcacaagctgcaggcccagcaccgtgaagagcagcagcgatgggagaaggagagg
gaccggcagagcatccagatcgagcgcctagaggctcaactgaaagagagggaggaggaa
tgcaggaaatgggaggagaagctcaatgaggagaaggcagagctggggaggcagcaggaa
acctaccagcagaacctggagcggctgagggagtccacaaaattggtggagaaggaaggt
gaacgggtgtctcaggagaaggaccgtctagaacagcagcaggagaagataaagaagtac
atgagccacattagccaggcacaagccaactatgacgaccccacacattacccaggtctc
tccagttaccagtcgttcaggggaagcatcattaacggaggtcggactctgaccccaaag
accctggtcttgcccagcatccagtctgatcccgaagaaactcctccaaaggttccaccg
cgcaaggagagcatcagccccctgccagtcaagcctgagctacccgtccacctcatcagc
accaccaaccaggactacaaacctgcacctgtgcagcagaagatccccacaaagctagcc
actctgtctaagggcaaggagaaagtcaagacaaaggggtcacaccagagaacacacagc
gcagcctctatagacgtgaaccaggtgctgcccatccgagtgacggggaaagaaggaggc
agtctgcgagccacaaggactgccagtcctcaaagaatctaccagtcagatgccttcaag
ccaccaggatctgcccacagtgtgaaaatgtctcagtccttcagcacacacaaaaggagc
aacagcgacgctccaccacctccaccgcctccatttcccaaagaaattctcaaaacggga
aaagagaaggtaatatttctttaa
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