Scomber japonicus (chub mackerel): 128369575
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Entry
128369575 CDS
T09718
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04110
Cell cycle
sjo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128369575 (smc3)
04114 Oocyte meiosis
128369575 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128369575 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128369575 (smc3)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128369575 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
128369575 (smc3)
Proteoglycans [BR:
sjo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128369575 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
128369575
NCBI-ProteinID:
XP_053186630
LinkDB
All DBs
Position
2:27119471..27150122
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLSRSEDLDSMIDKTEAEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttcagaagttatagggaccaaactgtggtg
gacccgttcagtccaaagcacaatgtcattgttggaagaaacgggtcaggaaaaagtaac
tttttctatgccattcagtttgtgctcagtgatgagttcagccaccttcgacctgagcag
cgcctggccttgctccatgagggaactggtcctcgtgtcatttcggcttttgtggagatt
atatttgacaactctgacaaccggctgccgattgataaagaagaagtctcccttcgtcgt
gtcatcggtgcaaagaaggaccagtacttcttagacaagaagatggtgactaagaatgat
gtcatgaaccttctggagagtgccggcttctcccgcagtaacccctactacattgtcaag
caaggaaagatcaaccaaatggctacggcacccgactcacagcgtctgaagctgctgaga
gaggtggcagggacacgggtgtatgatgagcgcaaagaggagagtatttcactcatgaag
gaaacagaggggaagagggagaagatcaatgagctgttgaaatacattgaagagcgtctg
cacaccctggaggatgagaaggaggagttggctcagtaccagaagtgggacaagatgaga
agagccctggagtacaccatctacaatcaggagctgaacgaaacccgtgccaagctggat
gagctgtcctccaagagagagacctgtggagacaaatccagacagctgcgcgatgctcag
caagatgcccgagacaaagtagaggagacggagcgtgttgtgcgggagctgaagtccaag
atctccgccatgaaggaggagagagagcagttgtcagctgagcgccaggagcagatcaag
cagaggaccaagctcgagttgaaggccaaggacctgcaggatgagctggcaggcaacagc
gaacagaggaaacgcctgctgaaggagcgccagaagctgctggagaaaattgaggaaaag
cagaaggagctacaagagacggagcccaaattcaacatggtgaaggaaaaagaggagcgg
ggcatctccagactggctcaggctacacaggagaggacagacctgtacgccaagcagggt
cgcggcagtcagttcacctccaaagaagagagggacaagtggatcaagaaggagctgaag
tctctggaccaagccatcaatgataaaaagaggcagatcgcagccatccacaaagacctg
gaagacactgagaccaacaaggagaagaacctggagcagtacaataaactcgatcaagat
ctaaatgaggtcaagacccgtgttgaggagctggacaaaaagtattatgaggtgaagaac
aggaaagatgaactgcagagcgaaagaaactacctgtggcgtgaggagaacgcagaacag
caggccctggcagccaaacgagaggacctggaaaagaaacagcagctccttcgagcggcc
accggcaaggccattctgaatggtatcgacagcatcaacaaagtccttgagcatttccgt
aggaagggcatcaaccagcatgtcatcaatggttatcacggcatcgtcatgaataacttt
gagtgcgagcccgccttttacacctgcgtggaggtgactgctggtaccagactcttttac
cacattgtggagactgatgaagtcagcaccaaaatactaatggagttcaataaaatgaac
cttcctggagaagtcacattcctccctctcaccaagctagacgtcagggacaccgcctac
cctgagaccaatgacgccattcccatgatcagcaagttgcgctacagcaccaacttcgac
aaagccttcaagcatgtgtttgggaagaccctgatttgtcgtagcatggaggtttccacc
cagctggccagagctttcaccatggactgtataaccttggagggtgaccaggtgagccac
cgtggagctctgacaggaggttattacgataccagaaagtctcgtctggagctgcagaag
gacatgaggaaagctgaggaggagctgggtgaactggaggccaaactcaatgagaatctg
cgcagaaacattgagcgtattaacaatgagattgaccaactgatgaaccagatgcagcag
attgagacacaacagaggaagtttaaggcatcccgagacagtattctctcagagatgaag
atgctgaaggagaagaggcagcagtcggagaagacattcatgcccaagcaacgcagtctc
caaagtctggaggccagtcttcatgccatggagtccaccagggagtcactgaaggctgag
cttggtacagatctgctctctcagctcagcctggaggaccagaggcgtgtcgacgacctc
aatgatgagatccgtcagctccagcaggacaacagacagctgctgaatgagaggatcaag
ttggaggggatcatgaccagagtggagacatatctcaatgagaacttgcggaaacgtctt
gaccaagtggagcaggagctaaacgagctgcgagagactgaaggaggcacagtgctcaca
gccacaacatctgagctggacggcatcaacaaacgtgtcaaagatactttgtctcgatca
gaagatctggattctatgattgacaagacagaggcggagatcaaggaccacataaagagc
atggagcgctggaagaacatcgaaaaggagcagaatgacgccatcaaccacgacactaag
gagctggagaaaatgaccaacaggcagggcatgctgctcaagaagaaggaggagtgtatg
aagaagatcagagagttgggctcactgcctcaggaggcatttgagaagtaccagaccctc
acactcaaacagttgttccgtaaactggagcagtgcaacacagagctgaagaagtacagt
catgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaggaaaagcta
atcaagcgtcaggaggagctagaccgtggctacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaagtatgaggccatccagctcaccttcaaacaggtgtcgaagaatttc
agtgaggttttccagaagctggtgcctggaggcaaagcaacactggtgatgaagaagggt
gatgctgaaggcagccagtctcaggatgagggtgagggtggtgcagacagtgagaggggc
tctggctcacagagcagcgttccctccgtggaccaattcactggagtcggcatcagggtt
tcattcacagggaagcagggtgagatgagagagatgcagcagctgtctgggggtcagaaa
tctctggtggctctggccctgatatttgccatccagaagtgcgaccctgcccctttctac
ctgtttgatgagattgaccaggccctcgacgcccagcacaggaaagccgtctcagacatg
attgttgagctggcagggcacgcccagttcatcaccaccaccttcaggcctgagctgctc
gaatcagctgacaaattctatggtgtcaaattcagaaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaagattttgtggaggatgacaccacccatggctaa
DBGET
integrated database retrieval system
