KEGG   Scomber japonicus (chub mackerel): 128369586
Entry
128369586         CDS       T09718                                 
Symbol
rbm20
Name
(RefSeq) RNA-binding protein 20
  KO
K24052  RNA-binding protein 20
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sjo03041]
    128369586 (rbm20)
Spliceosome [BR:sjo03041]
 Complex A
  Other components
   Complex A specific factors
    128369586 (rbm20)
SSDB
Motif
Pfam: zf-C2H2_jaz zf-met Mg_chelatase HR1
Other DBs
NCBI-GeneID: 128369586
NCBI-ProteinID: XP_053186641
LinkDB
Position
2:27163869..27215275
AA seq 1119 aa
MLGKGQSGGYTSEATGEVLQRISAVPVDCVDKKGLQLGGQLSGGVQVGPQQQNQQLLLTP
ASLQLAQLQAQLTLHRLKLAQGGNTATAATVLNQVLSNVAMSQPLFNQLRTSTMVGNPQG
AFPTGVLGFPSSNSTLGALVGGGFNQNPGNVRLNHHGGGTTVGQQGSEYAKKSGPVYPSD
TDRRLQYNLVGGTSAASTTAGDGQYTVISTQAENMNNVGYQRDFYGQDMQGQQAGFSVNE
QNMNVYNSTGHKEQWKGGSNLSNTGKGDMVSDAANVWTAAGQSIRSRTELYNPEEPTPDP
KFNPSTGISSGMHSFGGYQPLHGSEETSSGTRTLQPYQVNDYHAVTPTQLPHQCSICDKK
VYNLKDWDQHVKGKLHLQNRMLYTNEGSAVVSAGAVHYTVGRPSDGGLNTGGTNSMIYSA
ASQDVSSGANASYLPAAAMKTYPMSDTGFTSHQPESKPYPPRKATVGRVVHICNLPEGSC
TENDVINLGLPFGKVTNYILMRSTHQAFLEMAYIEAAQAMVQYYQLTPAMINNQKLLIRM
SKRYKELQLKKPGKDVQSIIHDINSQRERDEIQELEHYIPERARSRSPISRSLSPRSHSP
SFTSCSSAHSPQGAQCRGLERSTNGLGPRRGSWDWSSHLRRGEDERERDDPWRNGSGVDD
DRPNGRVADRRKAYQKPLDYISSRSADERGGDEGMRGNRDWYPRGSPQGMSFNSYRNMED
DFYAKEQMYKSDKLPKPSYQRHDTKSKRRDGGDYHSRLRHSEFEMTDEPLRRTPEDKKQS
SPGRARSKKTSRRHPPMERHERDNATENTNHQSKEKSVSPQRSNKTKDVTECSKDKHTEK
EGESGDDTDEECWYPKNMEELVTVDEVGGEDDSIIEPDLPDLEEYISCAKESAEEVAVEE
KLLPTTSSLEVQETSKEKSNQEKSCGDAGDQEETSVTEKAENVLTATRTEEQKLTPVISE
PPSTNLSDFPSEEFKAALEEACLEGKDKVTNSEPLEVPMEHHIRVSEENKTQEVRQVTET
IINEAKDKDGSLKKETEVPLSSREQDKAVSEHSIPLGVEFIVPRTGFYCKLCGLFYTSED
TAKTTHCRSTVHYRNLQKYLSHLAEESLSGALAEPSAIQ
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgcttgggaaaggacaaagtggcggatacacctcagaggcaacgggtgaagtcttgcag
agaatcagtgcagtgccagtggactgcgtcgataagaagggcctccagttgggtggccag
ctgtcaggaggtgtgcaggtggggcctcagcagcagaaccagcagcttctcctgacccca
gctagcctccagctcgctcagctccaggcacagcttaccctccatcgccttaaactggct
caggggggcaatacagccactgctgccactgttctcaatcaggttctttccaatgttgcc
atgtcccaacccctgtttaatcagctacggacttcaacaatggttgggaaccctcagggt
gccttccccactggggtgctgggtttcccctcttcaaattcaaccttgggggccttggta
ggtgggggattcaaccaaaacccagggaatgtaagactgaaccatcatggtggagggacc
acagtgggccaacagggttccgagtatgctaaaaagtcagggccagtttacccttctgat
actgacaggcgtcttcagtacaatttagttggagggacatctgcagcatcaaccactgct
ggtgatggacagtacacagtaattagcactcaggcagaaaacatgaacaatgttggatat
cagcgagatttctatgggcaggatatgcagggacaacaagctgggtttagtgtcaatgag
cagaacatgaatgtttataactccactggacataaagagcaatggaaaggcggtagtaac
ttgagtaatactggaaagggggatatggtttctgatgctgccaatgtgtggacagcagct
ggacagtcaattcggtccagaacagaattgtataacccagaggagccaacccctgacccc
aagttcaatcccagtactgggatttcaagtggcatgcatagttttgggggataccagccc
ctgcatggaagtgaggaaacatcttcaggtaccaggacacttcagccataccaagtcaat
gattaccatgctgttacaccgactcaactgccacaccaatgtagcatctgtgacaagaag
gtctacaacctcaaggactgggaccagcacgtgaagggaaaactacacctgcagaaccga
atgttgtacacaaacgagggctctgcagtggtatcggctggagctgttcactacactgtc
ggcaggccctctgatggaggtctgaacaccggagggacgaactctatgatctactctgct
gcaagtcaagatgtatcctcaggagccaatgcatcatacttaccagctgcagccatgaag
acttatcccatgtcagacacaggatttacttcacaccagccagagtcaaagccttatcca
cccagaaaggccacagtaggacgagtcgttcacatctgcaacctccctgaaggcagctgc
acagagaacgatgtcatcaacctgggactgccctttggcaaagtcaccaactacattctc
atgcgctctacccatcaggcatttctggagatggcgtatattgaagcagctcaggccatg
gttcaatactaccaactgactccagctatgattaacaatcagaaacttcttatacgaatg
tctaagaggtacaaggagctgcaactaaagaaaccaggtaaagatgttcaatcgatcata
catgatatcaactctcagcgggaaagggatgaaatacaagaacttgagcactacatacca
gagagagcacgatcccgcagccccatcagccgctccctgagtcctcgttcacacagcccc
agctttacatcatgcagctcagcacatagcccccaaggagctcaatgcaggggtctggag
agaagcaccaatggcctgggccctcgccggggctcttgggactggtcgtcacacttgaga
aggggtgaggatgaaagagagagggatgacccatggcggaatggaagcggcgtggatgac
gatcggcccaatggaagggtggccgaccgtcggaaggcataccaaaaacccttggattat
atcagctcaagatctgccgacgagcgaggtggagatgaaggcatgaggggcaacagagac
tggtacccacgaggcagccctcaaggcatgtccttcaactcttacaggaacatggaagat
gacttctacgcgaaggaacagatgtacaagtcagacaaactgcccaaaccttcatatcaa
agacatgataccaagtcaaagaggagagatgggggtgactaccacagtaggttgaggcat
tcggagtttgagatgactgatgagccacttcgcagaacaccagaagacaagaagcagagt
tcaccaggcagggcgaggagcaaaaaaacaagcaggagacacccccccatggagagacat
gagagagacaatgctactgaaaatactaaccaccagtctaaagaaaaatcagtttcacct
cagcgaagcaataagacaaaagatgttactgaatgtagtaaagataaacacaccgagaag
gagggggagagtggagatgacactgatgaagagtgttggtatccaaagaacatggaagaa
ctggtcactgtcgatgaagtaggaggtgaagatgattccattattgagccagaccttcca
gacctggaagagtatatttcctgtgccaaagagtctgcagaagaagtagcagtggaagag
aagttattaccaactacctcttcactggaggtacaagagacatctaaagagaagtctaac
caagaaaagtcatgtggggatgctggagaccaggaagaaacgtctgtaactgagaaagca
gagaatgttttaactgcaaccaggactgaagaacagaagctcactccagtgatttctgaa
ccaccaagtactaatcttagtgacttccccagtgaggagttcaaggctgcgctggaggag
gcctgtttagagggcaaagacaaagtaacaaacagtgagccattagaagtgccaatggaa
catcacattagagtatcagaggagaacaagacccaggaagtacggcaagtcacagaaaca
atcattaatgaggccaaagacaaggacggcagtcttaaaaaagagaccgaagtcccctta
tcatctcgagagcaagataaggctgtcagtgaacacagcatccctttgggagtggagttc
attgtgccaaggactggcttctactgtaaactttgtggactgttctacacaagcgaggat
actgcaaaaaccactcactgccgcagcactgtacactacaggaacctgcagaaatacctg
tcccacctagcagaggagagtctctcaggtgcactcgctgaaccttcagctatacagtga

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