Scomber japonicus (chub mackerel): 128369605
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Entry
128369605 CDS
T09718
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00310
Lysine degradation
sjo00514
Other types of O-glycan biosynthesis
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128369605
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128369605
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128369605
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128369605
Glycosyltransferases [BR:
sjo01003
]
O-Glycan biosynthesis
O-linked Gal type
128369605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
128369605
NCBI-ProteinID:
XP_053186656
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Position
12:complement(12719621..12723811)
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AA seq
598 aa
AA seq
DB search
MSLGFVGLGLTIVILAGELLLHTSAEELPADHLHHPAEQESSLLRHTVLITILARNVQHS
LPYFLGCIDRLDYPKDRISIWAASDHSEDNSTAMLQEWLRGVRHLYHSVEWRPIEQPSTY
ADEEGPKHWPDSRVVHVMKLKQAAVRAARQLWADYILFVDSDNLLTNRQVLTDMIAENLT
IVAPMLESESLYSNFWCGVTPQGYYRRTPEYIPIRKWQMKGCFAVPMVHSTYLLDLRRTV
SQDLAFHPPHTKYPYYIDDIMAFAFSAEQAGAQMYVCNRDHYGYLPVPLKQHQTMEEEEE
SFAHTLTEALISYTMEPSQYVHYTSKEPGKIGFDEIFLINLKRRADRRERMLSSLAVLGI
NVTLTEAVDGKALNSSQLQAIGIDMLPGYKDPYSDRVLTRGEIGCFLSHYNIWKQVVQQE
LQQVLVLEDDVRFEPRFCSRLVAIMKNVQGLGLDWDLIYVGRKRLQVKEPEHWVKGISNL
VHPGYSYWTLGYVLSLQGAKKLLRAKPLNKMLPVDEFLPLMFNKHPKDEYMQYFEQRNLR
SFSVEPLLLFPTHYTGEPGYFSDTETSTIWDDEAVETDWDRGLAKRRNEQETKDSKLK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttggatttgtgggattaggattaactattgtgattttagcaggagagctctta
ctgcacaccagcgcagaagagctaccagctgatcatctccaccatccagctgagcaggag
tcctctctgctcaggcacacagtactgatcaccatccttgcacgcaatgtgcagcacagc
ctgccatacttcttgggatgcattgacagactggactatccaaaggaccgaatttccatc
tgggcagcgtctgaccatagtgaggacaacagtacagccatgctgcaggagtggctcaga
ggagttcggcacctgtaccattcagtggagtggagacccatagagcagccgagcacatat
gcagatgaggagggtccaaagcactggcctgactctcgggttgtgcatgtgatgaagtta
aagcaggcagcagtcagagctgccaggcaactttgggctgactatatattgtttgttgac
agtgacaacttgctgacaaaccgtcaggtgctgactgacatgatagcagagaatctaaca
attgtggcacccatgttggaatcagaaagcctctattccaacttctggtgtggcgtgact
cctcagggctactacagacgaacaccagaatatattcccattcgcaaatggcagatgaag
ggttgctttgcagtcccgatggtgcactccacctacctgctggacctgaggcgcacagtg
agccaggatttggccttccaccctccacacaccaagtacccctactatatagatgacatc
atggcctttgctttctctgctgagcaagcaggagctcagatgtacgtgtgcaacagggac
cattatggatatttaccagtgcccctcaagcagcatcagaccatggaggaggaagaggag
agttttgcccacactctgaccgaagcactcatttcctacaccatggagccttcacagtat
gtacattatacatcgaaagaaccaggaaagataggatttgatgagatctttctgatcaat
ctgaagcgcagagcagacagaagagagaggatgttgtcctctctcgccgtcctaggcatc
aatgtcacactgacagaggcggtggatggcaaagccttgaactcctctcagctgcaagcg
ataggcatcgacatgctgcctggttacaaagacccatattcagaccgtgtgctgactaga
ggggagattggctgcttccttagccactacaatatctggaaacaggtggtgcagcaggaa
ctgcagcaggtgcttgtgctggaggatgatgtgagatttgagcccagattttgtagccgg
cttgtggccatcatgaaaaatgtacagggattgggacttgactgggacctcatttatgta
ggccgtaagaggctgcaagtgaaggagccagagcactgggtaaagggaatcagtaacctt
gttcacccaggctactcctactggactttgggatatgtgctctccctgcagggggccaag
aaactcctgcgtgcaaaacccctcaacaaaatgctgcctgttgatgagttcctacctctc
atgttcaacaagcaccccaaagacgagtacatgcagtattttgagcagaggaacctgaga
tcattttcagtggagcctctgttgctctttcccacacactacactggtgagcctggctac
ttcagtgacacagagacgtcaactatctgggatgatgaggctgtggaaacagactgggac
agaggccttgctaaacgccggaatgagcaggagacaaaagacagcaagctcaaataa
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