Scomber japonicus (chub mackerel): 128369644
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Entry
128369644 CDS
T09718
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128369644 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128369644 (aire)
04121 Ubiquitin system [BR:
sjo04121
]
128369644 (aire)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
128369644 (aire)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128369644 (aire)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
DUF7813
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
128369644
NCBI-ProteinID:
XP_053186698
LinkDB
All DBs
Position
12:complement(17710197..17715165)
Genome browser
AA seq
497 aa
AA seq
DB search
MSRVEAFRDTNLRSLLKELRTDIAMAIDDPFPLVYGLADKNIITDQLLKDTLEKESREGI
HKAMYTLLSWVLEQSRSIVQTFWSNLTKDYNLDSYPKLQTLLTNLHAKRDAAGSRSEKKS
SRDHKTPHSKKRSHEDRGTNSNDQLSQYHAKTSDEPGGKVKLYRVKSEAPALQSPSGNSN
YESSQNSASGVTVSSSVQRGVTLSSSSEPPVSHESREKIHIKQMFDSDGDARKSIKVGGE
FYSCGTSEDMKGASKVAMTTFHHRGETNTEVHYNDDECTLCKDGGELICCDGCPRAFHLT
CLDPPLICIPSGSWQCEWCRCNIVKKEKALQPLQPLVPQLQQTNTSSSNSIIDISFFSSL
SSSSLNNGRNQCSGGEPVSVREVCALCHLGGEDLTHCLQCLKHYHIHCNFSKGRSICWSC
SRPWGNSAEKEPESRSLQLTPVVQNTHSHEQSSSVTESVLHKDDLDSILGDGSIDGILQW
AFHNISRPLPDSQGCYQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtggaggcttttagggacacaaaccttcgctctctgctgaaggagttgcgt
actgatattgcaatggctatagatgacccttttcctctcgtctatggtttggcggacaaa
aacatcatcactgaccaactgctcaaggacactctggagaaggagagcagagaaggaatc
cacaaggccatgtacaccctcttgtcctgggtcttggagcagagcagatccatcgtccag
accttctggagcaacttgaccaaagactacaacctggacagctaccccaagctgcagaca
ctgctcactaacctgcatgctaaaagggatgctgcaggttcccgaagtgagaagaaatcc
tccagagatcacaaaacacctcacagcaagaagaggagccacgaggacagaggaactaac
tccaatgatcaactttcacagtatcatgccaagacaagcgatgaaccagggggtaaagtg
aagctgtacagagtgaagagtgaagctccagccctgcagtcaccatctggaaatagtaat
tacgaatcgagtcaaaattctgcctcaggtgtgacggtgtcttcctcagtccagagagga
gtcaccctgtcctcctccagtgagccaccagtcagccatgagtccagagagaagatccat
atcaagcaaatgtttgactcagacggtgatgcgagaaagtccattaaagttggaggggag
ttttactcatgtggtacatcagaagatatgaagggagcatccaaagttgctatgaccaca
tttcaccacaggggggagacaaacacagaggttcactataatgacgacgagtgtacattg
tgtaaggatggaggggagttgatatgttgtgatggttgtcctcgagcatttcacctgacc
tgcctggaccccccactcatatgtataccaagtggctcttggcagtgtgagtggtgccgt
tgcaacatagtgaaaaaagagaaagccctacaacctttacaaccactcgttcctcagctt
cagcagacaaacacgagttccagtaactccatcattgatatctccttcttctcctcactg
tcgtcctcatctctcaacaatggcagaaaccagtgctcaggtggagagccggtcagcgtg
agggaggtgtgtgctctttgtcacctcggaggagaagacctgacacactgcctgcagtgt
ttgaagcactaccatatacactgcaacttttccaaagggagatccatctgctggtcctgc
tccaggccctggggaaactctgcagagaaggagcctgaatccagaagtttacagctcacc
ccggtggttcaaaacacacacagtcatgaacaaagctcctctgtcactgagagcgtcctc
cataaagatgacctggactccatcctgggagacggctccatcgatggcatcttgcagtgg
gcctttcacaacatctctcggcctcttccagactctcaaggatgctaccagtga
DBGET
integrated database retrieval system
