Scomber japonicus (chub mackerel): 128369671
Help
Entry
128369671 CDS
T09718
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
KO
K24495
myomesin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128369671 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128369671 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128369671 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
ig
Ig_2
V-set
C2-set_3
fn3_2
Adeno_E3_CR1
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
128369671
NCBI-ProteinID:
XP_053186724
LinkDB
All DBs
Position
12:complement(22554742..22573568)
Genome browser
AA seq
1571 aa
AA seq
DB search
MSGSLQVSQKQQRHHLLHQHQEHQLHQHQEHHHHQHQEHHLHQQQEHHHHQHHEHHHLQH
QHHEHHHRQLQEHHHRQHQEHHQRQHHESSHYRSSKSAVSQQSFSTVKSTSHRVKTSVKT
EKGQEVKLSPLPKRARRPYLAMDTDKEVIGYVIPVFRANHDEVRGLMEAQEEYSTEEEGI
NYVAMRNLFVREAREATDVKVVKKTRTMHVRESAELLELGKTMDEWTEFRKKMNQDSLTH
PPEFIVKPRGQTAWEGKSVKLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTAESSYNMH
SLEIKKCDFLDTAQYHVSALNVKGEVSSVATVVIKRFGEDKAPGPLDVKPHGFCAEHGVT
FKTTIIDKFEVAFGHEGQTLSVGCTVIMYPTVKKYQPEVVWYRDSVPLKPSKWVHTHWSG
ERATLTLIHLNKEDEGMYTLRINTKSGFETYSAYVFVKDTEVEVEGVPVAPLDVHCHDAN
KDYVVVTWKQPAVEGSSPILGYYIDRCEVGTHHWAQCNDTPVKYARFPVTGLVEGRSYIF
RVTALNKAGVSRPSRVSEPVVAMDPSDRARLHAGPSAPWTGVIKFTEEDPTVGVVPGEPN
DVVVTEATKSYVVLAWKPPIQRGHEGVMYYIEKRISGTDTWQRVNTGMPVKSPRFALFDL
AEDKSYSFRVRCCNSAGVGEPSVATEEITVGDKLDLPSIPGDPVAIRNTNTSVVVSWGAS
KDVKRLVGYYIDCSVIGTEVWMPCNNKPVKQTRFVCHGLTTGANYVFRVRAVNAAGYSHM
SADSDAVVVQAAISVTGKPTKVVQLEALKDYMVLGWSAPADNGGADIRGYFVDYRTVKGG
IVGQWHEMNHEAVTTNSYKAENLKENVFYQFQVRAMNMAGVSEASLPSAALECKEWTLTV
PDAPVSLHVLEVRDTSVVLLWEPPAFDGRTPINGYYVDIKEASAGEASWKAVHEKAVKTK
YLKVTGLKGGKSYVFHVRAQNLAGVGNPSATVGPVVAHTHPGTKDIYVDVDDDGVISMIF
ECSEMSEGSEFVWSKNYKAITDSSRLTIVTEHGKSRAIFNDPSLEDLGIFSCVVTNTDGI
SSSYTLTKEGLLRLLDISHEHKFPVIPFKQEMSMELLEKGRVRFWTQLEKWTSDCQVEYV
FNDVIVTEGKKYQMHFDKSTGIIEMYTESLEVTDEGTFTFNLVDGKAKGTTSLVLIGEEF
RELQKKSEFERAEWIRKQGPHFVEYLGFTVTPECDVLLKCKIGNIKAETEITWFKDDIEI
REDDDDAVKIENKDGVLTFNIGKCIIKQEKKEKPGKKTPADDVPPMPRPKICKKDAGIYK
VTLKDERGKDKSTFSLTDEGYQTVMNELFRVIANSSTEVKVVSTEHGIILYSMVTYYTEE
QHVGWLHKDAKMAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVFDLA
GQAWEEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPVPEVSWI
KNDKELIADSHYHLKFEHGKYASITIDAVTTADSGKYALLVKNKYGTEAGEFTVSVYNPE
EEEKEKEAKKD
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatctttacaagtgtcgcagaagcagcagcgacatcaccttctccatcaacat
caggagcaccaactccatcaacatcaggagcatcatcaccatcaacatcaggagcaccat
ctccatcaacagcaggagcatcatcaccatcaacatcatgagcatcatcaccttcaacat
caacatcatgagcaccaccaccgtcaacttcaggagcaccaccaccgtcaacatcaggag
caccaccagaggcagcatcatgagagcagccattaccggagctccaagtcagctgttagc
cagcagtcgttctcaactgtcaagtccaccagccatcgtgtgaagacctctgtgaagaca
gagaaggggcaggaggttaaactgagcccactacccaagagagctagacgcccctacctg
gcgatggatacggacaaagaagttattggctatgttatccctgtatttagagccaatcat
gatgaggttcggggcctgatggaggcccaggaggagtattcaacagaggaggagggtatt
aactatgtggccatgaggaacctgtttgtcagggaggccagggaggccactgatgttaaa
gtggtgaagaaaaccaggactatgcatgtccgtgaatctgctgaactcttggaactgggc
aagacgatggatgagtggaccgagttccgtaagaaaatgaaccaagacagcctgacacac
cctccagagtttattgtcaagccccgcggacagactgcctgggaaggcaagtctgtcaag
ctgcactgcactgtggccggatggcccaaacccagaattgcctggtataaaaacaatgtg
ctgattgatgccaaggcccaccctgagaagtacacagctgagagcagttacaacatgcac
tccctggagatcaagaaatgtgatttcttggacactgctcagtatcacgtctctgccctc
aatgtgaaaggagaagtgtcttctgtggctactgttgttatcaaaaggttcggggaggat
aaggcaccaggtccgcttgatgttaagccacatggtttctgcgctgagcatggtgttacc
tttaagaccaccatcattgacaaatttgaagtggcctttggtcatgagggccagacactg
agcgtgggctgcacagtcattatgtatcccactgtgaagaaatatcaacctgaggttgtg
tggtacagagactctgtgcccttgaagccctccaaatgggtacacacccattggtctggg
gaacgtgccacactcaccctcatccacctcaacaaggaagatgagggcatgtacactctg
cgcatcaacaccaagtctggctttgaaacctactctgcttatgtgtttgtcaaagatact
gaggtggaagtggagggggttcccgtagcccccctggatgttcactgtcatgatgccaac
aaggactatgtggtggtaacctggaagcagccagcggtggagggcagcagtcccatcctg
ggatactacattgataggtgtgaggtgggcacccaccactgggcccagtgcaatgacact
ccagtcaagtacgcccgcttccctgtcacaggactggtggagggccgttcttacatcttc
agggtgacagctttgaacaaggcaggagtaagccgtccatctcgtgtctcagagccagtg
gtggccatggacccctctgacagagcccgcctccatgctggtccctcagccccgtggact
ggggtgatcaagttcacagaggaggatcccactgtgggcgtggtccctggagaacccaat
gatgttgtggttaccgaggcaactaagagctacgtggtgctcgcctggaagcctccaatc
cagaggggtcatgagggagtcatgtattacattgaaaagcgtatttcagggacagatacc
tggcagagggtgaataccggcatgccagtcaagtctcctcgctttgccctgtttgacctg
gcagaggataaatcctacagcttccgtgtgcgctgctgcaactccgctggtgtgggtgag
ccctctgtagccacagaggagatcactgttggcgataaactcgacctgccctcaatacca
ggcgatccagttgccatcaggaacaccaacacctctgtggtggtctcctggggggcatct
aaggatgtaaaacgcctggtgggctactatattgactgtagtgtgataggcacggaagtc
tggatgccttgcaacaacaaacctgtaaagcagaccaggtttgtgtgtcatggcctgacc
actggggcaaactacgtgttcagggtgagggctgttaatgctgctggatacagccacatg
tccgctgattctgatgctgtggttgtacaggctgccatctccgtcactgggaagcccacc
aaagtggtccagctggaagctctcaaggattacatggtgttgggctggtctgcgcctgct
gataacggaggagctgatatcaggggatactttgtggactataggaccgtgaagggaggc
attgttgggcaatggcacgaaatgaaccacgaggcagtgactacaaactcctataaagct
gagaacctgaaggagaacgtgttctaccagttccaggtgcgtgctatgaacatggcaggt
gtgagcgaagcctctctgcccagtgcagctctggagtgcaaggagtggacccttactgta
ccagatgctcctgttagtcttcatgtgctggaggtacgtgacacctctgtcgtgctgctg
tgggagccacctgcatttgatggccgcactcctatcaatggctactatgtggacatcaag
gaggcctctgctggagaggcgtcctggaaggctgtccatgagaaggccgtcaagacgaaa
tacttgaaagtgaccgggctgaagggtggtaaatcctacgtcttccatgtgcgtgctcaa
aatcttgctggagttggaaatccctcagcaaccgtaggtccagtcgtggcccatactcac
cctggcaccaaggatatttacgtggatgttgatgatgatggtgtgatctctatgatattc
gagtgctctgagatgagtgagggatctgagtttgtttggtccaagaattacaaggctatc
acagacagctctcgtcttactattgtcaccgaacatggcaagtccagagctatcttcaat
gatccttccctggaggatctgggcatcttctcctgtgttgtcaccaacactgacggcatc
tcctccagctacacactcactaaggagggtctcctgcgtcttctggacatcagccatgaa
cacaagttccctgttattccctttaagcaagaaatgtccatggaattgcttgagaagggt
cgcgtgcgattctggactcagctggaaaaatggacctcagactgccaagtggagtatgtc
tttaatgatgtcattgttaccgagggaaagaaataccaaatgcacttcgacaagtccact
ggcattattgaaatgtacacagaatctcttgaggtcacagatgagggaaccttcaccttt
aatctggtggatggcaaagctaagggcacaaccagtttggtgctcattggagaagaattc
agggagcttcaaaagaaatctgaatttgagagagcagaatggatcaggaaacaaggtcct
cactttgtggagtaccttggcttcaccgtgactccagaatgtgacgtgctgttgaaatgc
aagataggaaatatcaaagcagagactgaaatcacctggttcaaggatgacattgagatt
agagaggatgacgatgatgctgtgaaaatcgagaacaaggatggtgtgctgacctttaat
attggaaagtgcattattaagcaagagaaaaaagaaaaaccgggaaaaaagacacctgcc
gacgacgttcccccgatgccacgacccaaaatctgcaagaaggacgcaggtatttacaag
gtaaccctaaaggacgagagaggcaaagataagagcaccttcagtctgacagatgagggc
taccagactgtgatgaatgagctgttcagagttattgccaactcctccactgaagttaaa
gttgtcagtactgaacacggcatcatcctctactccatggtcacatattacactgaggag
cagcacgttggttggcttcacaaagatgctaagatggctgcctcagagagagttaagtct
ggagtcacaggagagcagctttggcttaagatcaatgagcccactgagaaggacaagggc
aaatacaccatggacatctttgatggcaaggacggtgtaaagagggtctttgatctggct
ggccaggcatgggaagaggcatttgaagaattccaaaggctcaaggcggcagcaattgca
gagagaaaccgcgctcgtgttgttggaggtttgccagatgtggttgcaatccaagagggc
aagtccctgaacctgactggcaatgtctggggtgagccggtacctgaggtatcctggata
aagaatgataaggagctgatagctgacagccactaccatctcaagttcgagcacggaaag
tatgccagcatcacaatcgacgccgtcaccacagctgactctggcaaatacgctctcctg
gtcaagaacaagtacggcacagaggccggtgagttcaccgtcagcgtttacaacccagaa
gaagaagaaaaggaaaaggaggcgaagaaagactaa
DBGET
integrated database retrieval system