Scomber japonicus (chub mackerel): 128369689
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Entry
128369689 CDS
T09718
Name
(RefSeq) homeobox protein MSH-C-like
KO
K09341
homeobox protein MSX
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128369689
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
128369689
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
128369689
NCBI-ProteinID:
XP_053186746
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All DBs
Position
2:complement(27382317..27383779)
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AA seq
277 aa
AA seq
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MAPSPCIMMNPVQGSPSQDAKQLHQKGETDTESDEVQPKDMTTEKGYKLQRSSLPFSVES
LISKKTTCRTSYSPSDLSLVLPKPVAGQGGQFSPRTFYAERKASAESSQSVSSSSSEDSP
QFCEKDQSTWFQTPSFSTPPRNSSPTQCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQY
LSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKFKLASKPVLPAFALPFPLG
AHMGSPTWGPSNAFPRPSLPVPGLFSGPVTYGMYYLS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccccatctccttgtattatgatgaatcctgtgcaggggtcgccgtcccaagacgcc
aaacagcttcatcaaaaaggggagacggatacggagagcgatgaagttcagcctaaagac
atgacgacggagaaaggatacaaacttcagcggagcagccttcccttcagcgtcgagtcg
ctgatttccaagaagaccacctgtcggacttcttattctccctcagatttatctctggtc
ctaccgaagcccgtggcagggcagggcgggcagttctctccaaggactttttacgcggag
aggaaggcttcggcagagagctcgcagagtgtttccagtagttccagcgaggacagtccg
cagttttgtgagaaagatcagagcacttggttccagacgccttccttttctactcctcct
cgtaattcaagtccaactcagtgtactttaaggaaacacaaaaacaacaggaaacctcgc
acgcccttcactacctcccagctgctggctctggagcgcaagtttcgccagaagcagtac
ctctccatcgccgagagagccgagttctccaactctctcaacctgacggagactcaggtc
aaaatttggttccaaaataggagggcaaaagccaagagactgcaagaggccgaactggaa
aagtttaaactggcctcaaagcccgtcctgcctgctttcgcgctgccgtttcccctcgga
gcgcacatggggtctccaacatggggcccgtcaaacgccttcccgcggcccagtctgccg
gtacccggactgttcagtggacctgtcacttatggaatgtactatttgtcttag
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