Scomber japonicus (chub mackerel): 128369801
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Entry
128369801 CDS
T09718
Name
(RefSeq) heavy metal-binding protein HIP-like
KO
K23284
C1q-related factor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128369801
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Opsonins
128369801
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
ATG16
BclA_C
Sec20
Taxilin
UPF0242
Tropomyosin
DUF7310
MAD
Cnn_1N
Crescentin
TNF
GAS
Cep57_CLD
ADIP
PUMA_CC
CALCOCO1
FPP
TMF_DNA_bd
DUF724
DUF4407
Motif
Other DBs
NCBI-GeneID:
128369801
NCBI-ProteinID:
XP_053186853
LinkDB
All DBs
Position
12:complement(33305024..33309498)
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AA seq
330 aa
AA seq
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MRRAAAFLALLLCLYWTGAQGESGGLTGNDVTQTEIQSEILGVKSTSDQTNISPDIWAEL
KELRDMVIEHRVELRKLEQENTAIQTRLTASEYKNAVLESKMTDSENVVKELQSENTELE
SKINASENVVKELQSENTVLEARMTTSENVMEELKKENTDLQSRVTASEDKTTVLEARMT
ASENLVKELQRENTDQPKVAFSLGLSDYGQIGPFNTDITLKFSKVFTNFGQVYSPTTGLF
TAPVRGAYYFSFNLLDSRSNAWRDVFLYHNDKRVLWSANYSAFSYESVSNSLVLQLEKGD
VVYLVLPAAHTLYDDTNNRTIFNGFLLFPL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtgctgcagcttttctggcgttgctgctctgtctgtactggacgggggctcag
ggtgagagtggagggctgacagggaatgatgtcactcagacggagattcagtctgagatc
ctgggtgtcaaatcaaccagtgatcagaccaacatcagccctgacatctgggctgagctg
aaggagctgagagacatggtcatcgaacacagagtggagctgaggaagctggagcaggag
aatacagccatacagaccagactgacagccagtgaatacaagaatgcagtgttggagtcc
aaaatgaccgacagtgaaaatgtggtcaaagagctccagagtgagaacacagagttggag
tccaaaatcaacgccagtgaaaatgtggtcaaggagctccagagtgagaacacagtgttg
gaggccagaatgaccaccagtgaaaatgtgatggaggagctcaagaaggagaacacagat
cttcaatccagagtaacagcgagtgaagataagaccacagtgttggaggccagaatgacc
gccagtgaaaatttggtcaaggagctccagagagagaacacagaccaaccaaaggtggcg
ttctcacttggtctcagtgattacggacaaattggacccttcaatactgacatcacactc
aagttcagtaaagtcttcaccaactttggtcaggtctacagtccaactacaggtctcttc
acagccccagtcagaggagcctactacttctcattcaatctactggatagtcggagtaac
gcatggagggatgtttttctctatcacaatgacaagagagtgttgtggagtgctaattac
agtgcatttagctacgaaagtgtttctaattcactggttcttcagctggaaaagggggat
gtggtctacctggttttacctgctgcccatactttatacgatgatactaataatcgtact
atctttaacggatttctgctttttccactgtga
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