Scomber japonicus (chub mackerel): 128369832
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Entry
128369832 CDS
T09718
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04382
Cornified envelope formation
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128369832 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128369832 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128369832 (lamc2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Baculo_PEP_C
T3SS_ATPase_C
YwqH-like
Fib_alpha
COG3_N
Motif
Other DBs
NCBI-GeneID:
128369832
NCBI-ProteinID:
XP_053186882
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Position
12:complement(34735417..34757141)
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AA seq
1130 aa
AA seq
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MNIRSSSWISVCCLLSAVCVQATYYTSVHCQCNGRSRYCLRYAGGLQCLNCQGNSEGRHC
ERCKPGFYQQGAKISCTACDCNPTGSLSATCDSRGRCSCKDGVMGERCDRCRDGPIGPDG
CSQSRQPREDSGSRSPLCFCYGHTSSCSSQSAYSVYDINSTFTNGPDGWWVATAQGVTPD
DVHFRWSPKYKDLEVISKNSLPVYLYAPASYLGNQLLSYGQNLSFSLRLDRGVRHPSTND
VVLEGSGLRVSASLGDLRSIVPCGQKISYSFRLDERSGSRWKPQLSSFQFQTLLQNLTAI
KIRATFGENGRGYLDNVQLGSARRGPGVPASWVQTCSCPRGYEGEFCERCSAGFTRRSQA
EGAFSPCEPCNCRGGSCDPQTGDCYSADETPADRSCSEGFYRDPLQPSSCRKCPCAEGVS
CSLPAGAQDPRCERCPPGTTGSRCDVCEEGFHGDPGRGDSVYSSCRPCECNGHIDVSVAG
SCDRRSGDCLKCVNNTEGSSCERCRRGFFHSSLNEACKPCDCDVLGSESTQCDDSGRCRC
RPGFEGSRCQRSDCPSCFSPVKAKMEAYANKLKDLERLFSDMDGGLKPTNSAEMEAALRA
TEQLVNNLQDTTDQLTEMEEGLKSRLASISRSQLTEGQEIQNMAAAADDIRRQHQTYETK
EATVQTLTKEMRQKLEAAKTILKSLEFPAADAPLGSNALSTLVQTATSLADKHQTKADTV
ERSANDALRDSEKSLALVRTLMNKENKVKETIGDLKATYDKISAQVKGFENQASRLSGEA
RDESKMADGMLKDIANMEREIPSSLKVEVDAMMTRLDGLKESVDQSIPEYEALQDSVQRD
KTVAEDLLAKGKAAQQDFNKLLDRVNVAKAETEGALKLINSNMGDLDESLNTLKGFDQQI
AGSKSQADAAIKRLPAINSTIQQAVRNNAETVSILGDVSNAYSSALGTINLAENSINGLE
GTIGSLPSHGDIMRDVTNLSEGATGLRGIAGTTAGDVAAELEKARKQEADAGEAAVGASA
AFNNAKKTRDAVGKTLRDVSNLLAMMNQPGVVDETRLKQLEDSLADAQRDVDDVLKPRLR
DMEDQESAQRRRLSGINVDIDTIMADIANLEDILKTIPKGCFNSPPIEEP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaggagcagcagctggatttcagtctgctgccttttatctgctgtgtgtgtc
caggcaacctactacacgtcggtgcactgtcagtgtaatggccgctctcgttactgcctc
cgctacgctggaggtctgcagtgcctcaactgtcagggaaactctgagggacgccactgt
gagcgctgcaaacccggcttctaccagcagggggcgaagatcagctgcaccgcctgcgac
tgcaaccccacagggtcgctgagcgctacgtgtgacagcagggggcgctgcagctgtaag
gacggagtgatgggagagagatgcgaccgctgccgagacggacccatcggacccgacgga
tgttcacaaagccgtcagcccagagaggattctgggagtcgtagtcctctgtgtttctgc
tacggtcacaccagcagctgctccagccaatcggcttactccgtctatgacatcaactcc
accttcaccaacggtcctgatggttggtgggtagcgacggctcagggcgttacccccgac
gacgtccacttccgctggtccccgaagtataaggacctggaagtgatctctaagaacagt
ctgccggtttacctgtacgctccagcttcttaccttgggaaccagttgcttagttacggt
cagaacttgtcgttctctctgcgtctggaccgaggagtcagacacccgtccaccaacgac
gtggttctggaaggatccggtctgagagtgtcggcgtcgctgggagacctgcgctccatc
gtcccctgtggacagaagatcagctacagcttcagactggacgagcggagcggcagcagg
tggaaacctcaactctcctccttccagtttcagacgctcctccagaatctcactgccatc
aagatcagagccacgtttggagagaacggacgcggttaccttgacaacgtgcagctgggc
tcggcccggcggggccccggggtccctgccagctgggtgcagacctgcagctgtcctcgg
ggctacgagggtgagttctgtgagcgctgctcggccggtttcactcggaggagccaggca
gagggagccttcagcccctgtgagccgtgcaactgtagggggggcagctgcgaccctcag
accggagactgttactctgctgatgagacccccgccgaccggagctgctcggagggtttc
tacagagacccgctgcagccctcgtcctgcaggaagtgcccctgtgctgagggagtgtcc
tgctcgctgcctgctggagctcaggacccccgctgtgagcgctgcccccccgggaccacc
ggctctcgctgtgacgtctgtgaggaaggtttccatggtgaccccggccgcggcgacagc
gtgtacagctcgtgcagaccgtgcgagtgtaacggacacatcgacgtcagcgtggcggga
agctgcgaccgacgcagcggggactgtctgaagtgtgtgaacaacacggagggaagcagc
tgtgagagatgtcgtagaggtttcttccacagcagcctgaacgaagcctgcaaaccgtgc
gactgcgatgttttgggctcagagtcgacacagtgtgatgattcgggtcgctgtcggtgc
cgaccgggcttcgagggttcaaggtgtcaacggtccgactgtccctcctgcttcagcccc
gttaaagccaagatggaggcgtacgctaacaaactgaaggacttagagcgactgttctca
gacatggacggaggtttgaaaccgaccaacagcgctgagatggaagctgctctgagagcg
acggagcagctggtgaacaacctgcaggacacaaccgaccagctcacagaaatggaggag
ggtctgaagtctcgtctagcgtcgatcagccggagtcagctgaccgaaggccaggagatc
caaaacatggccgccgccgccgatgacatcagacgccagcatcagacgtacgagacgaag
gaagcgaccgtccaaacgctgacgaaggagatgagacagaaactggaagcggccaagacg
atcctcaaatcacttgagtttcctgctgcagatgctccgctgggatcaaacgctctctct
acattggtgcagacagcgacgagcctggccgacaaacatcagacgaaggcggacacggtg
gagcgaagcgccaacgacgctctgagagactcagagaaaagtctggctctggtccggacg
ctcatgaacaaagagaacaaagtcaaagagacgatcggagacctgaaagccacgtacgac
aagatctcggctcaggtgaagggttttgagaaccaggcgagccgtctgagcggcgaggcc
cgagacgagagcaagatggcagacggcatgctgaaagacatcgccaacatggagcgagaa
atcccatcgtccctgaaggtggaggtggacgccatgatgacccggctggacggtctgaag
gagtcggtggaccagagcatcccagaatacgaggcgctgcaggacagcgtgcagagagac
aagaccgttgctgaagacctgctggctaaaggcaaagctgctcaacaggacttcaacaag
ctgctggacagagtcaatgtcgcgaaggccgaaaccgaaggtgctctgaaactcatcaac
agcaacatgggcgatctggacgaatcgctcaacaccctgaaagggttcgaccagcagatc
gccggcagcaaatctcaggctgacgctgccatcaagcgtcttcctgccattaactccacc
atccaacaggccgtcagaaacaacgcagagacggtgtccatcctgggagacgtgtccaac
gcctacagcagcgcactgggaaccatcaacctggcggagaactccatcaacggtctggag
ggaaccattggctctttgccgtctcacggcgacattatgagagacgtcaccaacctgagt
gagggagcgaccggtctgagagggatcgcaggcaccacagctggagatgtggctgcagag
ctggagaaggccaggaagcaagaggccgatgctggagaggctgctgttggagccagtgct
gcgttcaacaacgccaaaaagaccagagacgctgtgggaaaaacactgcgagacgtcagc
aacctgctggccatgatgaaccagcccggcgttgtggacgagacgcgtctgaagcagctg
gaggactctctggccgacgctcagagagacgtagacgatgtgctgaagcctcggctgaga
gacatggaggaccaggaatccgctcagcgacgccggctgtctggcatcaacgtggacatc
gacaccatcatggccgacatcgctaacctggaggacatcctgaagaccatccccaaaggc
tgcttcaacagcccgcccatcgaggagccctaa
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