Scomber japonicus (chub mackerel): 128369841
Help
Entry
128369841 CDS
T09718
Symbol
pkd2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128369841 (pkd2)
04040 Ion channels [BR:
sjo04040
]
128369841 (pkd2)
Cilium and associated proteins [BR:
sjo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128369841 (pkd2)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128369841 (pkd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
YVC1_C
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
DUF7783
Motif
Other DBs
NCBI-GeneID:
128369841
NCBI-ProteinID:
XP_053186889
LinkDB
All DBs
Position
2:complement(16907565..16915804)
Genome browser
AA seq
903 aa
AA seq
DB search
MSSSRVGPQQPPQSQAGRSAHRLDTSEGIEMENIQHQDLGLGGVIGTPSPPSRQAWSRDN
PGFEPEDEIMEADWPPASPGRRSVSTASSSSCSSGLGSYTGAGSSTHIPRGGGLYPTPTV
DAQQQDRHEYSNCMKKILHKIRILWGTELMEDSDSSRERYLRNVLREMVTYVAFLITTCI
LTYGMVSANMYYYTKVMSQLFVDTPLSAGDPSTFRSLSTMEDFWKFSEGPFLNGMYWEVW
YNNKSLPENQSLIYYENLLLGVPRLRQVKVHNDSCSIHEDLRDEVQDCYNMYTPTNEDTR
PFGPKNATAWVYTTESDMNGSSYSGQVSKYAGGGYYQDLSRTKEESAIQLQLLKDNLWLD
RGTRAVFLDFSVYNGNINLFCIARLLVEFPATGGVVTSWQFQTVRLIRYASSWDYFVGLC
EVAFCLFILYYVVEEVLEIHIHRLHYFKSLWNCLDVLIVALSVVAIIMNITRTAMVGNFL
KGLLENHTAHPSFESLANLQVQFNNMAAIIVFFSWIKLFKFINFNKTMSQLSSTMSRCAK
DLVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEEANPV
LGPIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSDMEMTDLIKKGCNKALMKL
RLKKTAVDDISDSLRQAGGKLNIDELRQDLKGKGHTDAEIQAIFAKYDHDGDQELTEHEH
QQMRDDLEKEREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVS
YEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLETMERAKLKRRDVLGRLLDGVIEDERLG
RDTDTHREQMERLVREELERWESDDMVSQVSHPQPATPVGPRPRPSSSLSTDGLDTSTNG
SHV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcccgagtgggaccgcagcagcccccgcagagccaggctggcaggtcggcc
cacagactggacaccagtgaggggatagagatggagaacatccagcatcaagacctgggg
ctcggaggggtcataggtactccatcacctccgtccagacaagcctggagcagggataac
ccggggtttgagcccgaggatgagattatggaagcagactggcctccggctagtcccggg
aggaggtccgtgtccacggcctccagcagcagctgcagcagcggcctggggagctacacc
ggcgctggcagcagcacccacatcccccgaggaggagggctgtacccgaccccgactgtg
gatgcacagcagcaagacagacatgagtactccaactgtatgaagaagatcctccataaa
atcagaattctgtggggcacggagctgatggaggacagtgacagcagtcgagaaaggtac
ctcaggaatgtactgcgagagatggtcacctatgtcgcattcctcatcactacttgtatc
ttgacctacgggatggtgagtgccaatatgtactactacaccaaagtcatgtctcagctt
ttcgtggacacacccctgtctgctggagacccttctacttttaggagcttgtcaacaatg
gaggatttctggaagttttcagagggacctttcctcaacggcatgtactgggaggtgtgg
tacaacaacaagagcctaccagagaatcagagtcttatctactatgagaacctcctactt
ggtgtgccacgcctgcgtcaggtcaaagtccacaacgactcctgctccatccatgaagat
ctgagagatgaggttcaggactgctacaacatgtacaccccaaccaacgaggacaccaga
ccctttggccccaagaatgcaactgcgtgggtatatacgacagagagcgatatgaatggg
agcagttactcgggtcaggtatccaaatatgcaggtggaggatactaccaagatctgtca
cgtacgaaagaggagtcagcaatccaactgcagttactcaaagacaacctgtggctggac
cggggcaccagagcggtcttcctcgatttctctgtctacaacggtaacatcaacctcttc
tgcatcgccaggttgttggtggagttcccagctactggcggggtggtgacctcctggcag
ttccaaacggtgcgtctgatacgatacgcgtccagctgggactactttgtgggtttgtgt
gaggtggcgttttgcctattcatcctctattacgtggtggaggaggtgctggagatccac
atccaccggctgcattactttaagagcctgtggaactgtctcgacgtcctcatagtggcg
ctgagtgttgtcgctatcatcatgaacataaccagaacagccatggtaggcaactttctc
aaaggcttgctggagaaccacactgctcaccccagctttgagtctttggccaacctgcag
gtccagttcaacaacatggccgcaatcatcgtctttttttcctggatcaagctttttaag
ttcatcaacttcaataagactatgagtcagctgtccagcaccatgtctcgctgtgccaag
gaccttgtgggttttgccatcatgttcttcatcatcttcctggcgtatgctcagctggcc
tacttggtgtttggaacccaagtcaacgatttcagcactttccaagccagcatttttacc
cagttccgtatcatcctgggagactttgagttctcagagattgaggaggcgaacccagtg
ctcggacccatctacttcaccacgtttgtcttcttcattttcttcattctcatgaacatg
ttcttggccatcatcaatgacacatactcagaggtgaaggccgatatgtcccagcagagg
tctgacatggagatgactgacctcattaagaagggttgtaacaaagctttgatgaagttg
agactcaaaaagacggcagtagacgacatctccgacagtttgcgtcaggcagggggcaaa
ttgaacattgacgaactccgccaggatctaaaagggaagggccacacagatgcagagatt
caggccatttttgccaagtacgatcacgatggcgatcaggagctgacggagcatgaacat
caacaaatgagagacgacttggagaaagagagagaggacttggagctggaacgtaattcg
ctgactagacccagcagtgggcggagcttccctcgcacccaggacgactcggaggaggac
gacgatgaagatagcggccacagctcacgtcgccgcggcagcagctcagggggcgtctcc
tatgaggagtttcaagtgctggtgagacgtgtggacaggatggagcactctattggcagc
attgtgtccaagatagacgctgtgatcgtgaagctggagaccatggagcgagctaaacta
aagaggagagacgtgctgggcaggctgctagatggagtcatagaggatgagcggctggga
cgggacacagacacccacagggagcagatggagaggctggttagggaggagctggagcgg
tgggagtctgatgacatggtctcacaggtcagccacccacagccagccacacctgtcgga
ccccggccccgcccctcctcttcactgtccaccgacggccttgacacaagcacaaatgga
agtcatgtgtga
DBGET
integrated database retrieval system
