Scomber japonicus (chub mackerel): 128369844
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Entry
128369844 CDS
T09718
Symbol
pex5lb
Name
(RefSeq) PEX5-related protein
KO
K13342
peroxin-5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128369844 (pex5lb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128369844 (pex5lb)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128369844 (pex5lb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_8
TPR_17
TPR_2
TPR_CcmH_CycH
TPR_11
TPR_19
TPR_16
TPR_14
CFAP70_mid_TPR
TPR_9
TPR_20
RMD1-3
CFAP70_TPR_C
ANAPC3
TPR_12
ARM_TT21_5th
DUF4315
TTC22_C
Motif
Other DBs
NCBI-GeneID:
128369844
NCBI-ProteinID:
XP_053186888
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All DBs
Position
12:complement(35411166..35447283)
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AA seq
611 aa
AA seq
DB search
MVLKELPGKKASSEGNPLLTVTTKLVGEQQESRPLLSPSIDDFLLESRSDAASTRPLTSN
TAVLSTALDLVDLSEPGDSSGGSSSGGSTGGGSTGGGSTKDRRRSPMRRKGSSRSPRRRV
RPDETELIQVEVEQLPASPRTPERVSLDSVSLSSPLDKWDEVNLDVEDGCRRRYEKRCTS
HHSSSELLWSAEFKTDPQNKNCFDIHSFDDLDFVSSTQDCGASRQCRRTRSLMAGNESLE
DEFVRAKAAVESDVEFWDKMQAEWEELARRNWLDDSDDQQPITASASPAEKGYFFNPTNP
YRDWPNAFAEGQEKAREGDLNAAVLLMEAAILQDPQDSEAWQVLGMTQAENENEQAAIVS
LQRCLELSPNNLAALMALAVSFTNSGLQREACDALRRWISHNPRYRHLVHSRRSPLQGSP
ALQRRGPPTTPHRGPPTALSQLQEVLLLFQEAAQMNLDCVDPDLQTGRGVLFNLSSDFNK
AVEAFTAALSVRPQDYLLWNRLGATLANGNRSEEAVEAYTRALELQPGFIRSRYNLGISC
INLGAHREAVSNFLAALNQQRTQQRCSLQQSTNIWSALRIAVSLMDRPDLVHAASLGDLD
LLLRVFNLEDV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaaggagcttcctggtaaaaaggcatcctcagaaggaaaccccctcctcacc
gtgacaaccaagctggtcggcgagcagcaggagagtcgacctctgctgagtccttccatc
gatgacttcctgttagagagccggagcgacgccgcctccacccgaccgctcacctccaac
acagcggtcctgtccacagctctggacctggtggacctcagcgagccgggggacagcagc
gggggcagcagcagcgggggcagcaccggagggggcagcaccggggggggcagcactaag
gaccgcaggaggagccctatgaggaggaagggcagctccagaagtcctcgccggcgggtc
agaccggacgagacggagctgatccaggtggaggtggagcagcttcctgccagtcccaga
actcctgagagggtttctctggactcagtcagtctgtcgtctcctctggacaaatgggac
gaggtgaacctggacgtggaggacggctgcaggaggagatacgagaagagatgcacctcc
catcactcgtccagtgaactgctctggtctgcagagtttaaaactgacccgcagaacaag
aactgcttcgacatccacagcttcgatgatctggacttcgtatcatccacacaggactgc
ggggcgtccagacagtgcagacggactcgttccctgatggccggaaatgaatctctggag
gacgagtttgtccgagcgaaggctgctgtggagtcggacgttgagttctgggacaagatg
caggcggagtgggaggagctggcacgcaggaactggttggacgactccgacgatcagcag
ccaatcacagcctccgcctcacctgctgagaagggttacttcttcaaccctaccaacccg
tacagagactggcccaacgccttcgctgagggtcaggagaaagctcgggagggagacctg
aacgctgccgtgctgctgatggaggccgccatcctgcaggacccgcaggactcagaggcg
tggcaggtgctggggatgacgcaggcggagaacgagaacgagcaggcggccatcgtttct
ctgcagaggtgtctggagctgagtcctaacaacctggcggctctgatggcgttggcggtg
agcttcactaacagcggtttgcagagggaggcgtgtgacgcgctgcgccgctggatcagc
cacaacccccgataccgacacctggtgcacagccgcaggagcccgctacagggttccccg
gccctgcagcgcaggggcccccccaccacgccacacaggggcccccccaccgcactctct
cagctgcaggaagtgctgctcctcttccaggaagcggctcagatgaatctggactgtgtg
gatccggatctgcagaccggacgcggcgttctgttcaacctgagctccgatttcaacaaa
gcggtggaggcgttcactgctgccctgtctgtcagacctcaggactacctgctgtggaac
cgtcttggcgccacgctggctaacgggaaccgcagcgaggaggcggtggaggcttacacc
agagctctggagctccagccgggattcatccgctccagatataacctgggaatcagctgc
atcaacctgggagcccacagggaggcggtcagtaacttcctggcggctctgaaccagcag
cggactcagcagcgctgcagtctgcagcagtccaccaacatctggagcgctctgcggatc
gccgtgtccctgatggaccggccggacctggtccacgccgccagcctgggggacctggac
ctgctgctgagggtcttcaacctggaggacgtctga
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