Scomber japonicus (chub mackerel): 128369848
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Entry
128369848 CDS
T09718
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04217
Necroptosis
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128369848
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128369848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128369848
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128369848
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128369848
Multi subunit type E3
LUBAC complex
128369848
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR_1
E3_UbLigase_RBR
IBR
Motif
Other DBs
NCBI-GeneID:
128369848
NCBI-ProteinID:
XP_053186893
LinkDB
All DBs
Position
12:complement(35885049..35897500)
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AA seq
504 aa
AA seq
DB search
MMGSLSLDPESSRDRGSSGSGSGVDRVQVRRSIGSDLAPPQALARLPPDRAAIFLSLLSL
EGRSFSPDDIMEAVQLSTDLPSALRFLTHCCPLCQDQVSFSKIITMTHCSCFLCQTCFKT
FFSTAIKEKSVDQLVCPQCGRPEVRGHGGMEESMDYFNLLDTQIRHFLPPQIHELFQRKL
RDRALQEMPNFCWCAHCSFGMLHEADRLRMDCPSCKKSTCSQCRSPWSPQHQGLSCQQFR
VWQQQNQPDQHSALLHHNSIECPRCQSIFSLSKGGCLHFTCSQCHHQFCGGCSRPFSPGS
ACRFSADCGSKGLHAHHPRDCLYHLRDWSVPRLHLLLQYYRVSPSWLEPAGGGSPDAGSP
DPGSPDAGPTGELSGGCSVELRDDGREEPCGLPAPPEYRGYCQIHYKERLVELINRCRAD
PAVLFSPGEMVAELQRWLVAVPTRKPEEPEPLYAHRLRMTLTNSVPLRKQRRSPLKLHDD
LCPLTSAVAAGAPPPHLLLSDSAP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatggggagtctgagtctggatcctgagtccagcagagaccgtgggagttctggttct
ggatctggagtggaccgggtccaggtgcggaggagtataggatcggacctcgcccccccc
caggcgctggctcggctgcccccggaccgggcggccatcttcctgtctctgctgagcctg
gaggggcggagcttcagcccagatgacattatggaggcggtccagctcagcacagacctc
ccatcggccctccggttcctgactcattgctgccccctctgccaggaccaggtgtccttc
agtaagatcatcaccatgactcactgctcctgcttcctgtgtcagacgtgctttaagacg
ttcttctcgacggccattaaagagaagagcgtggaccagctggtctgtcctcagtgcggc
cggccggaggtcagaggtcacggagggatggaggagtccatggactactttaacctgctg
gacacacagatccgacacttcctgccgccgcagatccacgagctgttccagaggaagctc
cgagaccgagctctgcaggagatgcccaacttctgctggtgtgctcattgttccttcggg
atgctccatgaggcggaccgactgaggatggactgtcccagctgtaagaagagcacctgc
tctcagtgcagatcaccttggtcccctcagcatcagggactctcctgtcagcagttccga
gtctggcagcagcagaaccagccggaccagcacagcgctctgctccaccacaacagcatc
gagtgtcccaggtgccagtctatcttcagcctgtctaaaggaggatgtcttcacttcacc
tgcagtcagtgtcaccatcagttctgtggaggctgcagccgacccttcagtcctggatcc
gcctgcaggttctctgcggactgcggttctaaaggtctgcacgctcaccaccccagagac
tgtctgtaccacctgagagactggagcgttccgcgcctgcacctgctgctacagtactac
agagtgtccccttcctggttggaaccggctggtggcgggtcacctgacgccgggtcacct
gaccccgggtcacctgacgccggtcccacaggtgagctctcaggtggttgttcggtggag
ctgagagacgacggcagagaggaaccctgcggactgccggccccccctgagtaccgagga
tactgccagatccactataaggagcgtttggtggagctaattaaccgttgccgtgccgac
ccggcggtcctcttcagcccgggggaaatggtggcagagctgcagcgatggctcgttgcc
gtgccgaccaggaaacccgaggagccagaaccgctctacgcacaccgcctccgcatgaca
ctgaccaatagcgttcctcttcggaagcagcgacgctctccgctcaaactgcacgatgac
ctttgccccctgacctcggctgtggccgctggagctccgccccctcacctgctgctgagt
gactccgccccctaa
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