Scomber japonicus (chub mackerel): 128370837 Help Entry 128370837         CDS       T09718                                  Symbol cltca Name (RefSeq) clathrin, heavy chain a (Hc)   KO K04646   clathrin heavy chain Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04142   Lysosome sjo04144   Endocytosis sjo05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:sjo00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     128370837 (cltca)    04142 Lysosome     128370837 (cltca)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     128370837 (cltca)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sjo04131]     128370837 (cltca)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sjo04147]     128370837 (cltca) Membrane trafficking [BR:sjo04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     128370837 (cltca) Exosome [BR:sjo04147]  Exosomal proteins   Proteins found in most exosomes    128370837 (cltca) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_PEP5_VPS11 TPR_COPA_B TPR_Vps41 Motif Other DBs NCBI-GeneID:  128370837 NCBI-ProteinID:  XP_053186982 LinkDB All DBs Position 13:24967224..24999014 Genome browser AA seq 1681 aa AA seqDB search MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPTQPGQTSPLLQYFG ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYME VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM NHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLQ EDKKECFAACLFTCYDLLRPDVVLETTWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL RKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQPYGYGYQQAPAGYPQAPAAQPGFGYG M NT seq 5046 nt NT seq  +upstreamnt  +downstreamnt atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttggggatc aatccggccaacataggcttcagcaccctaaccatggagtcggataagttcatctgcatc cgggagaaggtcggcgagcagactcaggtggtgatcatcgacatggccgaccccaataca cccatccgcaggcccatctcagccgacagcgccatcatgaatccagccagcaaagtcatt gcacttaaagacgccgccaaaactcttcagatcttcaacattgagatgaagagcaagatg aaggcacacaccatgacggacgatgttaccttctggaagtggatctccctcaacacagtt gcccttgtgactgacaatgccgtctaccactggagcatggagggtgactctcagcccgtg aaagtctttgaccgtcactccagcctggcaggctgccagattatcaactaccgcactgac gccaagcagaaatggctcctgctcatcggtatctcagcccagcaaaatcgggtggtggga gccatgcagctgtactctgttgacagaaaggtttctcagcccatcgaaggccatgctgcc agctttgcccagttcaagatggagggaaacacagaggaatcgactctgttctgctttgct gtcagaggccaggctggaggaaagttgcacatcattgaagtggggaccccaccaaccggc aaccagccattcccaaagaaagcagtggacgttttcttccctccagaagctcagaacgac ttccctgtggccatgcagataagctccaagcaggatgtggttttccttattaccaaatat ggttacatccacctttatgacttggagacaggcacctgcatctacatgaaccgcatcagt ggagagaccatctttgtcactgctccacatgaggccacctccggcattatcggcgtcaac aggaagggacaggtgttgtcagtctgtgtggaagaggagaacatcatcccttacatcact aacgtgctgcagaatccagatctggctctccgtctagctgtccgcaacaacctcgctggc gccgaagagctctttgcacgcaagttcaacaacctgtttgcggccggcaactactccgag gctgccaaggtggctgccaatgcaccaaagggtatcctgcgaaccccagataccatccgt cgcttccagggcgttcccacccagccaggccagacctcccccctgcttcagtactttggc atcctgttggaccaaggccagctcaacaagtttgaatccctggagctttgcaggcccgtc ctccagcagggacgaaagcagcttttggagaagtggctgaaggaagacaagttggagtgc tctgaagaactgggcgacctggtgaaggcagtggatcccaccttggccctcagtgtctac ctgagagccaacgtccccaacaaggtcatccagtgctttgcagaaactggacagttcccc aagattgtcctgtatgccaagaaggtgggctacactccagactggatcttcctgctgagg aatgtgatgcggattaacccagaacaaggcctgcagtttgcccagatgctggtccaagat gaagagccactcgctgacattacacagattgtggatgtgttcatggaatacaacctgatc cagcagtgcacttcgttcctcctggacgctctgaagaacaacagaccatcagagggacca ctgcagactcgcctactggagatgaacctcatgcatgctccacaggttgctgatgctatc ctgggcaaccagatgttcaccaactacgaccgcgcccacatcgcccaactgtgtgagaag gctggactcctgcagagggctctggagcactacactgacctgtacgacatcaagcgtgct gtggtgcacacacacctcctcaacccagagtggctggtgaacttctttggctcgttgtcg gtggaggactctctggagtgcctcagggccatgctgtcggccaacatccgccagaacctg cagatctgtgtccaggtggcctccaagtaccatgagcagctcaccacacagtctctcact gagctctttgagtcattcaagagctttgaaggtctgttctacttcctgggctctatcgtg aacttcagtcaggatcctgaagtccacttcaaatacatccaggcagcctgcaagacgggc cagatcaaagaggtggagaggatctgtagagagagcaactgctacgaccctgagcgcgtc aagaacttcctcaaggaagccaaactcaccgaccagctgccactcatcatcgtgtgcgac cgcttcgacttcgtccacgacctggtgctctacctgtaccgcaacaacctgcagaagtac attgagatctacgttcagaaggtgaatcctagccgtctgcctgtggtggttggaggtctc ttggatgtggactgctcagaggatgtcatcaagagtctgatcctggtcgtcaggggacag ttctccactgacgaactggtcgctgaggtggaaaagaggaacagactgaagctcctgctg ccctggctggagtctcgtatccatgaaggctgtgaggagcccgccacccataatgccctg gccaagatctacatcgacagcaacaacaaccccgaacgcttcctgagggaaaatcccttc tatgacagccgcgtggtgggaaagtactgcgagaagagagacccacacctggcttgtgtg gcctacgagagaggacagtgtgaccaggagctgatcaatgtctgcaacgagaactccctt ttcaagagcttgtcccgctacctggtccgtcgcaaagatcccgagctgtgggccagtgtg ctgctggagagcaatcccttcagacgtccactcattgaccaggtggtgcagacagcgctg tcagaaacccaggacccagaggaggtatcagtcactgtcaaggccttcatgaccgccgac ctgcccaacgagctcattgagctgctggagaagatcgtgttggacaactctgtcttcagc gaacacagaaatctgcagaacctgctgatcctgacagcaatcaaagccgaccgcactcgc gtgatggaatacatcaacaggcttgacaactacgacgctcccgacatcgcaaacatcgcc atcagcaacgagctcttcgaggaggccttcgccatcttcaagaagtttgacgtcaacacc tccgcagtgcaggtgctgatcgagcacattggcaacctggaccgggcttatgagtttgca gagcgctgtaatgagccggctgtgtggagccagctggcaaaggctcagttacagaaggag ttggtcaaggaggccatcgactcctacatcaaagctgacgacccctctgcatacatggag gtggtacaggctgctgataagagcggaaactgggaggacttggtcaaatttcttcagatg gctcgtaagaaggcccgcgagtcgtacgtggagacagagctgatctttgctttggccaaa accaaccgcctggctgaactggaggagttcatcaacggacccaacaatgctcacatccag caggttggtgaccgctgctacgatgagaaaatgtacgacgctgctaagctgctgtacaac aacgtctccaacttcggtcgtctggcttcgaccctggtgcaccttggggagtaccaggcc gctgtggacggtgcccgcaaggccaacagcacccgcacctggaaggaggtgtgcttcgcc tgcgtggacggaaaggaattcagactggctcagatgtgcggcctccacatcgttgtgcac gctgacgagctagaagagctcatcaactattaccaggaccgcggttactttgaggagctg atcaccatgctggaggcggccctgggcctggagcgcgctcacatgggaatgttcaccgag ctggccatcctctactccaagttcaagccccagaagatgagggagcatctggagctcttc tggtccagagtgaacatcccgaaggtcctgagagcagcggagcaggctcacctgtgggcc gagctggtgttcctgtacgacaagtacgaggagtacgacaacgctatcatcaccatgatg aaccacccgacagacgcctggaaggagggacagttcaaagacatcatcaccaaggtggct aacgtggaactgtactacaaagccgtccagttctatttggagttcaagcccttgttactg aatgatctgctcatagtgctctcacccagactggaccactcccgtgctgtcaacttcttc agcaaggtgaaacagctgccactggtcaagccctacctgcgctcagtacagaaccacaac aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggattatcaggca ctgaggacatcaatagatgcctacgacaacttcgacaacatctcactggcccagcgtctg gagaaacacgagctgatcgagtttaggagaattgctgcctacctcttcaaaggcaacaac cgctggaaacagagtgtggagctgtgcaagaaggacaagctctacaaggatgccatgcag tacgcgtcagagtccaaggacacagagctagcagaggagctgctgtcctggttcctacag gaggacaagaaggagtgttttgctgcctgcttgttcacctgctacgacctgctgcggccc gacgtggtgctggagaccacctggaggcacaacatcatggacttttctatgccatatttc attcaggtcatgagggagtacctcagcaaggtagataaacttgaaacctcagagtcccta cggaaagaagaggagcaggcaacagagacgcaacccatcgtctacggcacaccccagctg atgctgacagcaggccccagcgtacctgtgccccctcagcaaccatacggctacggctac cagcaggcgcctgcaggataccctcaggctccagcagctcagccaggcttcggctacggc atgtaa

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