Scomber japonicus (chub mackerel): 128370839
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Entry
128370839 CDS
T09718
Name
(RefSeq) cell adhesion molecule DSCAML1-like isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128370839
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Other
128370839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Ig_5
Fn3_ROS1
Ig_6
C2-set_3
Sp38
Receptor_2B4
Ig_SEMA-3_4_7A
Fn3_Dep-1_3rd
Fn3_VIN3
ChitinaseA_N
Lit
Motif
Other DBs
NCBI-GeneID:
128370839
NCBI-ProteinID:
XP_053186984
LinkDB
All DBs
Position
13:complement(20787464..20835911)
Genome browser
AA seq
2127 aa
AA seq
DB search
MHGSLGRRGGDMGGAEVPLISPPCLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQ
IFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTIL
DSFQAGELYAGQSIELPCTAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWY
RNTEPIVPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMEVILQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYR
VVFWSLFPDGGGCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLSRGKQYHIWAAAVTTAGRGNISAKVTVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTT
QLFLSELREATWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGS
HGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTIT
ECFISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHR
ANKSEFCNLPLYMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAK
QQALTLGHSGLGSLGASSGTATLPQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDS
LLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtagtcttgggaggagaggaggggacatgggcggggctgaggttcctctcatt
tcccctccatgcttagcggggcagcagggctggagagacctccggggagcacagtcgcca
gtccagcacggagacccacctggccaaaaaaccgcgcctcacacttgccaggattgccaa
atattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctctaccaggctgtactttgtgaat
gcctccctgcagagggtaacctactccagctcggtgggggtgtccctgccctgtccagca
ggcggcacccccagtgccatactacgctggtacctggccaccggcgacgacatctacgac
gtgccccacatccgccatgtgcacgccaatggcaccctgcaactttaccccttctcgccc
tccgcctacaacagctacatccacgacaacgactacttctgcactgctgaaaaccaggcg
ggcaagatccgcagccccaacatccgcatcaaagctgttttcagggagccctacaccgtg
cgggtggcagaccagcgctcgatgcggggcaacgtagctgtgttcaagtgcctcatcccc
gctgccgtgcaggagtatgtcagcgttgtgtcctgggagagagacactgtttccatcgtc
ccaggtaacaggttctcgctgacctccttcggggctctttacatctctgatgttcagaag
gaggatgccctctccacataccggtgcatcaccaagcataagtacagcggcgagacgcgc
caaagcaatggagccaggctctccgtaatggaccccaacgagtcctctcccaccatcctg
gacagtttccaagcaggggagctgtatgcaggccagagtatcgagctcccctgcacagcg
ggaggttaccccagccctactgtacgctggctgaaagatggtcgcccactgccctcagat
gcccgctggacacggcgtttgacagggctgaccatcagtgacctgaggcaggaggacagc
ggcagctatgcatgcgaggtcaccaacagttttggctcaaaggaggtgtctgggcagctt
cacgtgatagatccgttacgagtgaccttgtcccctaagaatctgaaaactggcatcagc
agcacactgttcttcacttgcactgtggagggctctccagaatacaccatcacctggtac
aggaacacagagcccatcgtccccgaccagcacatctccatccagggacaacacaacgac
acgctgcagatcactgcggcacagaagttccactctggggcctaccagtgctttgcttcc
cgcaagggccacactgctcaggacttttccattattctgctagaggatggtactcctcgt
atcgtgtcttccttcagcgagcgggtggtgaaccccggcgagcccttctccctaatgtgt
gcggctaaaggagccccgcccccttccatcacctggacgctggacgatgagcctgtggtg
cgagactccacctacaagaccagccagtacaccctgtctgatggcctgaccgtgtcacac
gtcaacgtcagcagcccgctcattcgagatggaggagtgtatcgttgcgtcgcacgcaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccgccccgaatcaga
cccatgcgggacatcaccgcagtagcaggcaggaatacctacataacgtgccgtgtgatt
ggctacccttattactctatcaagtggctgaaggacggcatgcagctgcctgataatcat
cgtcaagttgtgttcgagaatggcaccctgcggctgacggatgtgcagaagggtgcggac
gagggcacctacttgtgtagcgttctgatccagccccaggtgtcaatcaaccagactgtc
catgtcactgtcaaagtgccaccgctcatccagcccttcgatatcccctctacctcagtg
gggaagctcatgtacattgcctgtgtggtgtcatctggggacatgcccatacgcatcacc
tggcacaaagacggccagctcatcgtgccaggctccgcctctggcgtcgcaatagagacc
aaagagttcatgagttccctgcaaatctccaaggtgacactgaagcacaacggaaactac
acctgcatcgccagcaacgctgccgccactgtcagctgggaaagacagttgattgttact
gtgccaccacgttttgtggtgcagcccaacaaccaggattgtatctatggtaaagctgga
gtcctcaactgctctgtggagggttacccacctccaaaagtcatgtggaaacacgccaaa
ggtgtaggaaacccacagcagtaccacccagtccctctaactggccgtatccagatcatg
tcaaacggctctctactcatccgacatgtgcttgaggacgaccgtgggtactacctttgt
caggcctccaacggagtgggctcagacatcagtaagagcatgatcctcaccgtcaagatt
cctgccatgatcaccagccaccccaacaccaccatggcgaggaagggccagaccaaggag
ctgaactgcacagcgcggggcgaacagccgatcatcatccgctgggaaagaggggacacc
gtcattgatgctgaaagaaacccccgttactccatcaccatcaacaagaagggggatgaa
gtcatctctaccttaaagctaaacccagctgagcgaggagattctgtcttcttctcctgc
catgccatcaactcctatggagagggtcgagggctcatccaacttactgtgcaggaacca
ccggatccccctgagctagaagtgagggaggtgaaggacaggagcatgaaccttcgctgg
atccaaaggtttgatggaaacagtatcatcaccagctatgacatcgagtacaagaacaag
tctgactcctgggatcacatgtacacaaccaggaacatctcgcccaccaacaaccaggcc
aacattgtagagttgcacccagcctgtgtttatagcatccgcatgtactcctacaataag
attggccgtagccttcccagcaaagagctcacaatcagcactgaggaagcaccacctgac
gggccaccgatggaagtaatccttcagccgatgacatctcagagcatacgggttacatgg
agggctcctaagaaggaactgcaaaacggggtgatccgaggctaccagatcggttacaga
gagaacggtccaggcagcaacggccagtacagcatagtggagatgaaagctacaggagac
agtgaagtgtacaccttggacaacctaaagaagtttgcccagtacggggttgtggtccag
gcctttaacagagctgggacgggcccatccagtactgagatcaacgctaccacactggaa
gatgtgcccagtgagcctccgcagaacgtgcgagccatctcggtgacgtcggacgaggcg
gtgatcacatgggcagagcctccacggctgacgctgcacggtgtgctgaaaggctaccgg
gttgtgttttggtccctcttccctgacggaggtgggtgctgtgggggccaggcccagtgg
ccaatgcagaagtggggagagatgcagaatatcaccaccacacgtgaacaggtggagctg
cgagggctggagaaattcactaactacagtgttcaggtgctggcctacacacaagctggc
gatggagtccgcagcaacgtcctgtatatccaaacccgcgaggaccttcctggtcctccg
gctggcatcaaggcagtcccctcctctccgagtagtgtggtcgtgtcttggttacctcct
cacaaaccaaatggtgttatccgcaagtacaccatctactgctccagtccagggtctgga
cagccggcacccagcgagtacgaggccaacccagagatgctcttctaccgtatcacgcac
cttagccgtggtaaacaataccacatctgggctgcagccgtgacaactgccggccgaggc
aacatcagcgcaaaggtcacagtggaacctgctgggaaagtcccagctaagatcctgtcc
tttggaggcacagtgaccactccttggatgaaggaagtgcgtctgccctgcagctcagtg
ggagagcccgcccccacgattaaatggaccaaagacagtgaggactccgccattccagtg
acagctgacagtcagcggcagatcttatccaacggcacactggtgctgcgttcagtcaaa
gcagaggattctgggtactacacctgtacagccactaacacccttggctttgacaccatc
atagtcaatcttgtggtacaagttcctcctgaccagccccgtctgactgtctccaccacc
tccacctcctccatcaccctggcttggatccctggggacaatggtggaagctccatcaga
ggatttgtgctgcagtactctgtggacaacacagaggaatggagggatgtgttcatcagc
tccagcgaacgttccttcaggttggacaatctgcgctgtggaacctggtacaaggtcaag
ttggctgctaagaacagtgtgggctcagggcgcatcagtgagatcattgaggctaaaaca
catggcagagagccagtattcaacaaggaccagccgctgctcacccacatcaactccact
catgcgggtctcaacctgcagggctggaccagtggtggttgccccatcactgacttgatg
ctggactttaggcccaaaggtacctgggcctggcagagcctcaaggccaactccaccact
cagctcttcctcagtgagctgcgtgaggccacctggtacgagctcaaaatgaaggcctgc
aacagtgctgggtgtggcaaccagagctcccagtttgccaccactgactatgatggcagt
acaatccctcctattaaatcagctcgtggagaaggggatgatgtgaaaaagctgttctcc
attggctctcctgtcatcctggttactctgggtgtcgctttgcttttcattatccgcaag
aaacgtaaggagaagaggcttaaacgactcagagatgctaagagcctcgctgagatgctt
atcagcaagaacaatcgcagtatagacactcctgtgaagggtcctcctcaaggaccgagg
ctccatattgacatcccccgggttcagctactcattgaggacaaggaaggcattaaacag
ataggagaggacaaggcagctgtgccagtgacagacactgagttcagccaatcagtgaat
cctcagaacttctgcacaggcgtgtctcttcaccaccaggcccttatccagaattcaggg
cctttgattgacatgtcagacatccggcctggcacaaatcctgtgtctaggaagagcata
aaatcagctcacagctccaggaacaggtactccagccaatggaccctgagccgtccgagt
cagagccagtcgacagcctcggcacgaactctgacctcagactggcggaccatgggttct
catggcatcacagccacagagagcgacagctacagtgccagcctctctcaagacacagac
aagggacgcaacagcatggtgtcaacagagagcgcctcgtccacctatgaggagctggca
agggcctacgaacacgccaagctggaggagcacctgcaacacgccaagttcaccattaca
gagtgtttcatctctgacagctcctctgaccaaatgaccacaggtaccaatgaccctgca
gacagcatgacctcgctcagcacgccgtctgaacctggtatctgccgcttcactgcctcg
ccacccaaaccgcaggactatgaccgcggtaaaaatgtggctgttcccattccccaccgt
gctaacaaaagcgaattctgcaacctacccctctacatgaagacagacccattcttccgc
aagcaaggggagctgcatgacccatgcccagctgtgccaccgagggaagcctcaattcgt
agcctgacgcaacgggcgtatcacacccagggccgtcacaagactctagaccctgccaag
cagcaggccctgacgctgggccactctgggctgggcagcttgggtgcgagctcgggcact
gccaccttgccccaaaggactctcaccatgcccagctccaacactgcagcaacagcttcc
acttccagcacgagcagcaaccccaccaacagtaacaaggtggggggctccagagactcg
ctgctagagagcagctcctctgcattggggagactgcagaaacagagtgtgggggcctac
tccaagtcatacacactggtgtag
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