Scomber japonicus (chub mackerel): 128370841
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Entry
128370841 CDS
T09718
Symbol
myo1ca
Name
(RefSeq) unconventional myosin-Ic
KO
K10356
myosin I
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128370841 (myo1ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128370841 (myo1ca)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128370841 (myo1ca)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128370841 (myo1ca)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128370841 (myo1ca)
04147 Exosome [BR:
sjo04147
]
128370841 (myo1ca)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128370841 (myo1ca)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Others
128370841 (myo1ca)
Others
Actin-binding proteins
Myosins
128370841 (myo1ca)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128370841 (myo1ca)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128370841 (myo1ca)
Exosome [BR:
sjo04147
]
Exosomal proteins
Proteins found in most exosomes
128370841 (myo1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
128370841
NCBI-ProteinID:
XP_053186988
LinkDB
All DBs
Position
13:complement(20754606..20766314)
Genome browser
AA seq
1045 aa
AA seq
DB search
MRYQGREVDVEGRVRLVMESALTARDRVGVQDFVLLENYNSEAAFIENLRRRFGENLIYT
YIGSVLVSVNPYKELEIYSKPQMERYRGVSFYEISPHIYALSDNAYRAMRTERKDQCILI
SGESGAGKTEASKKILLYYAVTCPTNDHMAALGDRLLQSNPLLEAFGNAKTLRNDNSSRF
GKYMDVQFDFRGAPVGGHILNYLLEKSRVVHQNHGERNFHIFYQLLDGGDDDLLHMLDLE
RNPQNYQYLVKGNCPRVSSISDKNNWKVVMKALSVIGFTEEEVQKLLNIIASVLHLGNTQ
FGEGEEGETYITTETQITNLAKLLGVDGSALSEALTHKKLTAKGEEMISPLNFEQAVSAR
DALAKAMYGRTFTWLVEKINRSLALKDEIYHSSKGSSVIGLLDIYGFEVLQTNSFEQFCI
NYCNEKLQQLFIELTLRSEQEEYETEGIAWETVEYFDNKIICDLIEEKHKGIISILDEEC
LRPGETCDVSFLEKLEDSLGSHPHFVTHKLANGKTRRVMSREEFRLLHYAGEVNYNVNGF
LDKNNDLLNRNLKEVMCQSDNQILSHCFHREEVIDQKRPEMAATQFKNSLMKLMEILMSK
EPSYVRCIKPNDAKQPGRFDEVLVRHQVKYLGLMENLRVRRAGFAYRRRFEAFLQRYKPL
CPETWPNWHGRLVDGVSTLVNHLGYKAEEYKLGRSKIFIRFPKTLFTTEDALEAKKPDIA
LTLQTSWRGYRERAKYQRIRHAVIVIQSGWRGMKARRRAKRRRQAADLIRRFIKGFIYRH
EEYCPENEYFLDHVRYSFLKNLRKNLPKSVLDKSWPTPPPSLIEASEHLQRLHMRNMVTK
YCRRVQPEWKKQMLQKVEASEIFKDQKDSYPQSVGRLFLDSRLEDEQINLKVVQTLGNEK
VQYGVSVTKYDRRGFKPRPRQLLLTNTFAVLVDRTKIKQRIDYPSLRGISVSSLSDGMFV
LHLPSEDNKQKGDAVLHCHHVIEVVTKLAMMANKTSYVNISPGSIRFAVARAKEGIIDFV
RGSELKVAKGKRGHLLVTAPQINTT
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaggtaccaaggcagggaggtggatgttgaaggaagagtgcgtctggtgatggagagc
gccctgactgcccgggacagggtcggggtgcaggactttgtcttgctggaaaactacaac
agtgaggcagccttcatagagaacctgcggcgacgctttggagaaaacctcatctatacg
tatattggctcagtgctggtgtcagtgaacccttacaaagagctggagatttactccaag
ccgcagatggaacgctacagaggggtcagcttctacgaaatatcgcctcacatttatgcc
ttgtcagacaatgcctaccgggctatgcggactgagaggaaggatcagtgtattctcata
tcgggtgagagcggagcaggtaaaacagaagcctctaagaagatcctcctctactacgcc
gtcacctgccccaccaatgatcacatggctgcccttggagaccgcctactccagtccaac
cctcttttggaggcatttggcaatgccaaaacactgaggaatgacaactccagccggttt
ggaaaatacatggatgtccagtttgacttcaggggggcaccagtaggcggtcacatccta
aactacctgctggagaagtctcgtgtagtgcatcagaaccacggcgagaggaacttccat
attttctatcagcttctggatggaggggatgacgatctgcttcacatgctggaccttgaa
agaaaccctcagaactaccagtatctggtcaagggaaactgtcccagagtcagctccatc
agtgacaagaataattggaaagttgtgatgaaagctttgtctgttattggcttcaccgaa
gaagaagtgcagaaactgctgaatatcatcgccagtgttctccatctgggaaacactcag
tttggggaaggggaggaaggagaaacttatatcaccacagagactcagataacaaatctt
gcaaagttgctgggtgtcgatggctcggccctcagtgaggctctcactcacaagaaactc
accgcaaagggagaagagatgatcagcccactaaattttgagcaggcagtgtctgcccgc
gatgccttagccaaggctatgtatggtcggaccttcacttggttggtggagaagatcaac
cgatcacttgctctgaaggatgaaatctaccacagcagcaaaggctcctcagttataggt
cttctagatatctatggctttgaggtactgcagaccaatagttttgagcagttttgcatc
aactactgcaatgagaagctccaacagctgttcattgagctcaccctcagatctgagcag
gaagagtatgagacagagggaattgcatgggagacagtggagtactttgacaacaagatc
atttgtgatctgattgaggagaagcacaaaggcatcatctccattctggacgaagagtgt
ctgagacctggagagacttgtgatgtctcctttttagagaaactggaggattcactgggc
agccatccccattttgtcactcacaagttggcaaatggaaaaactcgcagggtaatgagt
agagaggagttcagacttctgcattatgctggtgaggtcaactacaacgtcaatggtttc
ctggacaagaacaacgatttgctgaacaggaacctgaaagaggtcatgtgccagtcagac
aaccagattctaagtcactgcttccacagagaggaagtgatagaccagaaacgcccagag
atggcagccacacagtttaaaaatagcctgatgaaactgatggagatcctcatgtccaaa
gagccatcctatgtgcgctgtatcaagcccaatgatgccaagcagccaggtcggtttgat
gaagttctggtgaggcaccaggtgaagtatctcggcctgatggaaaacctgagggtgagg
agagctggctttgcctacagacgccgctttgaagccttcctacagaggtataagccactg
tgtcctgagacatggcccaactggcatggcagactcgtggatggtgtatctacactggtc
aaccacctgggctacaaagcagaagagtacaaactgggcaggtcaaaaatctttatccgt
ttcccgaaaactctcttcaccacagaagacgcactcgaagcaaaaaagccggatatagct
cttaccctgcagacatcatggagaggctacagggagagagccaaataccaacgcatcaga
catgcagtgatagtgatccagtctgggtggcgagggatgaaagcacgcaggagggctaag
aggcgtcgacaggctgctgatttaatacgcaggttcataaaaggcttcatttaccgtcat
gaggaatactgcccagagaatgagtatttcctggatcatgtacgctactcctttctcaag
aatctacgcaaaaacctgcccaagagtgttctggacaaaagctggcccacacctcccccc
tccctcattgaggcctctgagcacctgcagaggctacacatgcggaacatggtaacaaag
tattgcaggagggtgcagcctgagtggaagaagcagatgctgcagaaggttgaagccagt
gagatcttcaaggatcagaaagacagctacccacagagtgttggcagattgtttttggac
tccaggctggaagatgagcaaatcaatctcaaagtggtccaaacactcggcaatgaaaaa
gtacagtacggtgtttcagtcacaaaatatgacaggaggggtttcaagcctcgccctcgg
cagctgctgctcactaacacctttgctgtgctggtggacaggaccaagatcaagcagagg
attgactatccaagtcttagaggtatctctgtgagctccctcagcgatgggatgtttgtt
ctgcacttgcccagtgaggacaataagcagaagggcgatgcagtgctccactgccaccat
gtgattgaggtggttacaaaactcgccatgatggccaacaagaccagctatgtcaacatc
agcccgggaagtatcagatttgctgtggctcgcgccaaggaaggaatcattgatttcgtc
aggggttcagagctgaaggtggccaaaggcaaaagaggacatctgctagtgactgcccct
cagatcaacacaacatga
DBGET
integrated database retrieval system