Scomber japonicus (chub mackerel): 128370848
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Entry
128370848 CDS
T09718
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128370848 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128370848 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128370848 (ncor1)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128370848 (ncor1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
128370848 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
128370848
NCBI-ProteinID:
XP_053186994
LinkDB
All DBs
Position
13:complement(23904363..23963019)
Genome browser
AA seq
2460 aa
AA seq
DB search
MSSSSGYPPSQGNFSSEQSRYPPHSVQYTFSGSRHQQDFTVPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTAQSDHEILESKRPRMETVSESHITRTPPTTGGIVL
PMPHTVQDSLRATVEVKKESQFTVKVESASPGGHTLHMGEEQDTSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEDKSDDKNEEDKSEKSEKKEDEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPHA
PEPALPDPPQLPKADPAQKSMKEPAKPQTPVASMDANKAGVGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LATASPDDDDDDDNADDSEGGDNSSDTESAPSPSQADSLKSGDSKRADSAAGDAHFSDQD
KGQASNGKALEPSYEQLCVKQEKSPESESGSQEERARMSYMGSLHPKTEPQDVDMKTGEV
QVKMEPEIKEKGEKGDHGERHRELHSDNDSSATCSADEDVEAEPERQRIFSMDKPSLLNP
PGSVLVSSPKQAQLNIQQLQSRAAAIPPMVSGPYGPGGVPISGFAMLQHQIKAVHESAHQ
EEKQRQDQGDLERRPPFNTCSPTILDRDGKPLPYMPYDMMLALDQETLSGRPGSPYRLSP
RDLSKALPPSDPNGPNASRYSVPPVLHPSPNQLVQGMPDGVRVTFSRPSRPPNIPSPPPL
IPTTKPTDKPSFIQGGSISQISDPKSCSNVIVWSGATQISTAIRHRNIEWVDSVGLITTT
KGTPGTYLPSHAVYGPDGTKSTVGSISLGLPRQQDPNKPGAAVPSIQDGRGNPGKVGEGL
TFRGSITQGTPALAQSSIAADLLKGTITKLATEDLNSPDKARGEQMAKGHVIYEGKRGHI
VSYEAIKNPRENTRSPRTGHELKRNYDMMEGPMGRGHPGREGAPYEGLISRALPREGLHG
DSKERPLMSGSIMQGTPRTAGESYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGINTI
KEMGRSIHEIPRQDQSGQDMCKTPDLTDRRGMEGSISQIHPLNQSTIKHNVKSLITSPNK
IPHSIPQLEAMERAKYEESKAVRHTSVVNSTTSVLRSTHQEANKSQLSPGMYEDANARRT
PVNYSTNPVSRGSPMLGRGQEGGMSSKSAAHERKSAMTPTQRDNVPAKSPVSGGDPVASH
SPFDPHHRPVVPGEVYRAHLPPHLDPTLAFHRVLDPAFMFPRQPSPTGYHNTYQLYTMEN
TRQTILNDYITSQQMQVIPRPDMARGMSPREQPVAIPYAAGARGIIDLAQMPPTILLPHP
GGTGTPTLERIAYLPGAQPPFPPRAFNPTSISPGHQAHLAAAAAASAEREREREQHREQQ
EKEREKEREQRERERERDREIRERERDRERSNEYMRSAGGPEQPGRPGSRGYLHSPSPSM
RTQDVVVQQRPSIFQGKSVITSLMPHSAAVTAAAQSSSRYSTAADALAALVDAAASAPQM
DVAKVKENKHDRDDDMSSSAAARRATTLSEQQQQQEAERRPLQSPYGVMSLPGGKPHPAY
SEGPGVGVKDKGPQTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDSRERGSQSS
DSSSSLSSSRYDNPAGGAIEVISPASSPVQSQQDKPDDGQQQAPAGMRAYDMSRYRPSAE
PPQPSSQQPPSSQADSYSQVPKTHRVMTLADHISHIITQDFARNQDPPPSSSASAPFQSG
VPNVSSSGRAKVPSRYSPENQVQAPHHQRPSNRVSPENAPDKSRARPGKSPERGGRPMEN
YEPISPPQSYQGMDKQNAGGPPPQRREAENSEIRNDSRSPGSVGYLPSFFTKLENTSPMV
KSKKQEIFRKLNSNSGVGDSDVGNAQPGTEIFNLPAVTSSSSINPRNHSFSDPASNLGLE
DIIRKALMGNLEERPEEHQGGAINNTPSTGSDSRQEANPSPSMVKQKQSKANSRKSKSPN
LGQAYAGGERPSSVSSVHSEGDYHRQTQAQPQWSWDDRPSSTGSMQFPYNPLTMRILSST
PPTSMASPSIQSQQQQQQQQQQQQQQQQQQQPLAGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccagccaggggaacttcagcagcgagcagagccga
tacccaccgcattctgtccagtacaccttcagcggctcgcgccaccaacaggatttcacc
gtcccagactatcggactcacatgcaggatccacagggtcggagaagaccatctttactg
tctgaattccaccctgggactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactccgtcacagcccagtccgatcatgaaatcttggagtctaaacggcctcgcatg
gagaccgtttctgagtcccacatcacccgcacccctcccaccactgggggtattgtcctg
ccgatgccccacacagtacaggacagcctcagagccaccgtggaggtcaaaaaggagtct
cagttcacagtcaaagtggagtccgcatccccaggaggacatacactacacatgggggaa
gagcaggacacttcgccttccaaactatccaaggaggagctgatccagagtatggaccgc
gtggaccgagagattgccaaagtcgagcagcagattttcaagctgaagaaaaagcagcaa
caactagaagaggaagcagcaaagccagtggagccagaaaagccagtgacccctcccccg
gtggaacacaagcaccgcagcatagtccagatcatctacgatgagaacaggaaaaaagct
gaagaagcccataaaatacttgaaggtcttggccctaaggttgagctgcccctgtacaat
cagccgtcagacacaaaggtgtaccatgacaacatcaaaaccaaccaagtcatgaggaag
aagctgattttgttttttaagaggaggaaccacgctcgtaaacaaagggaacagaagatc
tgccagcgctacgaccagctgatggaagcttgggagaagaaggtggagcgaatggagaac
aaccccaggcgcaaagccaaggacagcagaacacgggaatattacgaaagacaatttcct
gagatccgcaagcagagagagcagcaggagcgcttccagagggtcggacaaagaggaact
ggcctttctgcaacaatagcaagaagcgagcatgagatttcagaaatcatagacggcctt
tctgagcaggagaacaacgagaagcagatgagacagctgtcagtcatccctcccatgatg
tacgactccgagcagaggcgggtgaagttcatcaacatgaacggcctgatggacgacccg
atgaaggtgtacaaagcccggcagttcatgaatgtgtggaccgaacacgaaaaggagatc
tttaaggagaagtttgtccaacaccccaagaactttggcctgattgcctcctacttggag
agaaagtgtgttgctgactgtgtcctgtactactacttgaccaagaagaaccacaactac
aagacgctcgtgaggcggaactacgggagacggagaggaaggaaccagcaaataacacgt
ccctcacaagaagacaagtcagacgacaaaaacgaagaggacaaatccgaaaagtctgag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcgtctgtggcggctgaggaagcacctccccatgcc
cctgagcctgctttgccagatcctccacagctccctaaagccgatcccgcgcagaagtcc
atgaaggagcctgcaaaaccccagactccagtagcttccatggatgctaataaagctggt
gttggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaa
gggctagtcgagcacgggcgaaactggacggccatcgccaaaatggtgggcaccaaaagc
gaggcgcagtgcaagaacttctatttcaattacaagagacgccacaacctggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgaaggt
ctagccacagcatcacctgatgacgacgacgacgacgacaacgcagatgacagtgaaggt
ggtgacaatagctctgacacagagagtgccccctctccctctcaggctgactccttaaag
tccggcgactccaagagggcagacagcgccgcaggagatgctcatttctcagaccaggac
aaaggtcaggccagcaacggaaaagccctggagccctcctatgaacaactctgcgtcaag
caagagaaaagcccagagagtgagagtggatctcaggaggaaagggccaggatgtcctac
atgggctcactgcatcccaaaaccgaacctcaggatgtggacatgaagaccggagaggtt
caggtcaagatggagcccgagatcaaggagaaaggagaaaagggagatcacggcgagagg
cacagggagctccactcagataatgactccagcgccacctgcagtgctgacgaggatgtg
gaagcagagcctgaaaggcagagaatattctccatggataagccttcactgctgaatcct
ccaggctcggtattggtgtcctcacccaagcaagcccaactcaacatccaacagctgcag
agtcgggcagctgccatcccacccatggtgtctggtccttatggccctggtggtgtgccc
atcagtggcttcgccatgttgcagcaccaaatcaaagcggtgcacgagtcggcacatcaa
gaggagaagcagagacaggatcagggagacttggagcgcagacccccattcaacacctgc
agccctaccatactagacagagatggtaagcccttaccctacatgccttatgacatgatg
ttggctctggaccaggagaccctctctggtcggccaggctctccctacagactctccccc
agggatctgagcaaggccttacccccgtctgaccccaacggccccaatgcatcccgctac
agtgtgccgccagtcctccacccttcccccaatcagctggtccagggtatgccagatgga
gtccgcgtgactttcagcagacccagtcgacctcccaacattccctctcctcctccactc
attccaaccaccaagcccacagacaagccctccttcattcaaggaggctccatctcccag
ataagtgacccaaagagttgtagcaacgtgatagtgtggagtggtgcaacccagatttca
acagccatccgtcatagaaacattgaatgggttgactcagttggcttgattactactacc
aagggaactcctggcacatacctgccgtcccacgctgtctatgggccagatgggactaag
agcacggtgggctccatctctctgggtctcccacggcaacaggatcccaacaagcctgga
gctgcagttccatccatacaggacggcagaggcaacccagggaaggtgggcgagggtctg
actttcagaggatcaatcactcagggcacaccggccctggcccagtctagcattgctgct
gatctcctgaagggcacaatcaccaagctggccacagaggacttgaacagcccagacaag
gccagaggagaacagatggctaaaggtcatgttatctacgagggcaagcgtggacacatc
gtctcctatgaagctatcaagaaccccagggaaaacacccgcagccccagaactggtcat
gagctgaaacgcaattacgacatgatggagggacctatgggcaggggacacccagggagg
gaaggagctccatatgaggggctgattagcagagccttgcccagagaaggactccatggg
gattctaaggaaaggccattgatgtctggatccattatgcaaggaacacctagaaccgct
ggagagagctatgaagagtccatgaaatatggaaaacagataaagcgagagagcccaccg
atccgctccttcgaagggggtattggcaagggaaagccttatgagggaatcaatactatc
aaagagatgggacgctccattcatgaaataccccgacaagaccagtctggacaggacatg
tgcaagacccctgaccttacagacagaagggggatggagggctccatatctcagattcac
cctctgaaccagtcgaccatcaagcacaatgtcaagtccctgatcaccagtcctaacaag
attccccacagcataccccagcttgaggccatggaacgagccaaatacgaggagagcaag
gcggtgcgccacacgtcagtggtcaactccaccacctctgtcctgcgctccacgcaccag
gaggccaacaaatcccagcttagcccgggcatgtatgaggacgccaatgcccgcaggacc
cctgttaactatagcactaatcctgtgtccaggggatcacccatgctgggacgtggtcag
gaaggtggtatgagctcaaaatctgcggcgcatgaaaggaagagtgccatgacaccaaca
cagagggacaacgtcccagccaagtccccggtgtctggaggtgaccccgttgcctctcac
agccccttcgacccccaccaccggcctgtcgttcccggagaagtgtaccgagcccacctg
cctccacatctggaccccaccttggccttccacagagtgctagatcctgcgttcatgttc
cccaggcagccgtccccaactggctaccacaacacataccagctgtacaccatggagaac
acgcggcagactatcctcaacgattatatcacttcccagcaaatgcaagtcatcccgagg
cctgacatggcccgaggcatgtcaccacgggaacagccagtcgccatcccttatgcagcc
ggagctcgagggataattgatctagcccagatgcctccaactatcctgttgcctcaccct
gggggaacaggtactcccactttggaacgcatcgcctacctccctggagctcagccccct
ttccctcctagggctttcaacccaacctccatatcgccaggtcaccaagcccaccttgcc
gctgccgccgccgccagtgcagagagggagcgggagagggagcagcaccgggagcagcag
gagaaggagagagagaaggaaagggagcagcgggagagggaacgagagcgggaccgggaa
attcgggaacgagagcgggaccgggagcgaagcaacgaatacatgcgtagcgcaggtgga
ccagagcagccaggccgaccagggagtcgaggttatctgcactcgccttctccttcaatg
aggacacaggatgtagtggttcagcaacggccgagcatcttccagggcaagagtgtcatc
acctctctaatgcctcattcagcagcagtgacagcagctgctcagagcagctctcgttac
agcaccgcagctgacgcactggctgctctggtggatgctgcggcctccgccccgcagatg
gacgtagccaaggtgaaggagaacaaacacgatcgggatgatgacatgtcctcgtcagct
gcagctcgacgagcaaccaccctgtctgaacaacagcagcagcaggaggcggaaaggcga
cccttgcagtcaccatatggtgttatgtctctgccaggaggcaagccccatcctgcttac
tccgagggccctggtgtcggggtgaaggataaaggacctcaaacgtcaaagtcccgcatc
gaagaggagctccggacccgtggaaagacaactattacggccgctaacttcattgatgtc
atcatcacccggcagatagcttcagacaaagactcgagagagcgaggatctcagagctct
gactcgtccagcagcttgtcatccagtcgctacgacaaccctgctggaggagccattgag
gtgattagtcctgctagttctccagtccagtcccaacaggacaagccagacgacgggcaa
cagcaggcaccagctggcatgcgggcttatgacatgagtcgttaccggccatcagcggag
cctccgcagcccagttcccagcagcccccctcatcccaggctgacagctactcccaggtc
cccaagactcacagggtcatgactttggcagatcacatttcgcatatcataacccaggac
ttcgcccggaatcaggaccctcccccgtcctcctcagcttctgccccattccagagcggg
gtaccaaatgtgtcctcctcaggtcgagccaaggtgcccagccgctacagtcctgagaat
caggtccaggccccacaccaccagagaccctcaaacagagtttccccagagaatgcccca
gacaagtccagagccaggcctggtaagtctcctgagcgaggcggcaggccgatggagaac
tatgaacctatctctccaccacagagctatcaaggcatggacaaacagaacgctggtggg
cctccaccccagaggcgggaggcagaaaactccgagatcaggaatgactcacggtccccg
ggtagtgtcggctatctgccctccttctttaccaagctggagaacacctcgccaatggtg
aaatccaaaaaacaggagatctttcgtaagttgaactccaactctggtgtcggtgattct
gatgttggaaacgcacaaccaggcactgagattttcaatttgcctgctgttaccagctcc
agcagtatcaaccccaggaatcactccttcagtgacccagccagtaacctgggcctggag
gacatcatccgcaaggccttgatgggcaacttggaggagagaccagaggaacaccaggga
ggagccatcaacaacacacccagcacaggcagtgactcacgtcaggaggccaacccatcg
cccagtatggtgaagcagaagcagagcaaagccaacagccggaaatcgaagtcacctaac
ctgggtcaggcctacgctggaggggagcgtccatcttcggtgtcctccgtccactccgag
ggagattatcacagacaaacccaagcccagcctcagtggagctgggatgaccgaccctca
tccacaggatccatgcagttcccttacaacccgctgaccatgcgcatactgagcagcacg
ccacccacctccatggcttccccctccatacagagccagcagcagcagcagcagcagcag
cagcaacaacagcagcagcagcagcagcagcagcctctagctggagcaccggtggcccag
cagcgagtgtggcagtctctgctgtcagaacaatatgagaccctgtctgatagcgacgac
tga
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integrated database retrieval system
