Scomber japonicus (chub mackerel): 128370889
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Entry
128370889 CDS
T09718
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
sjo04210
Apoptosis
sjo04217
Necroptosis
sjo04218
Cellular senescence
sjo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128370889
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128370889
04217 Necroptosis
128370889
04218 Cellular senescence
128370889
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128370889
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128370889
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
128370889
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C2: calpain family
128370889
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_7
EF-hand_6
EF-hand_1
S_100
Cwf_Cwc_15
CDC45
Motif
Other DBs
NCBI-GeneID:
128370889
NCBI-ProteinID:
XP_053187049
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All DBs
Position
13:15043428..15048707
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AA seq
714 aa
AA seq
DB search
MSETGTCTSIINLRYQDGSEGSPTNPAKFNNQDYEQLKSYSSRRDRLFVDRTFPPDNRSL
GDLPDMPSWKENKVEWLRPKDVLKAQGSSEDPSFSLKGASRFDFGQGSVGNCWFLAAISA
LTFQKGLMAQVVPMDQSFRNYSGIFHFRFWRFGKWVDVVIDDHLPTLNGQLLSVRSKGGN
EFWAPLLEKAYAKVCGTYADMNAGLPSEACKDFCGGVHMTFELSQVHDYSHDDKLWLQLS
RATGCKSMICCGTAPKGGEIVNTVATTGLVDAHAYSVTGVTEVELYGSKKRLVRCMNPWG
SQEWSGDWSDKSKLWDRVSPDDRAKCSDREDGEFWMELEDFCRYFNMMSICCENPNFLDG
DLTCQWKCMIYDGKWEAGRTAGGRSSTGSFAKNPQYRINVTKINKNEENDMNILISLMQK
PQLEGRKDAQKRYHAINVSVYKVPEGTRSGRLPSSFFNRNRPMNLRQMYAYQREKIAEYS
LELGEYVIVPSTYKAHQNAEFVLTVFSKADSKITPHDHDDDDDDDHHHSDDEDEDVPKPS
TDHDDDDDDDNDSDRALFKRYADQRGNLSARQLRKLLNDNFPHGTSYGFGLDTCRSMIAM
MDTDRNWRMGFPEFSKLWTKINEYKTLFKRTDVNRNGSLQSGEVKEAIKSKGMDVNDFMV
QMMMIRYSGSYTTMEDFIVLMLRLDKGSDIFNSSSSDGVITMSWEEWTSNMMYN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactggaacctgcacgtccatcatcaacttgcgctaccaagatggcagtgag
ggaagcccaactaatcctgccaagttcaacaaccaagactacgagcagctgaaatcttac
agtagccgcagagacagactgtttgtggacagaaccttcccacctgacaaccgatctctg
ggagacctgcctgatatgccatcatggaaagagaacaaagtggaatggcttcgcccaaag
gatgtcctgaaagcacaaggcagcagcgaagatccttccttcagtttgaaaggagcttca
aggtttgactttggtcaaggcagtgtgggtaactgctggtttttggctgcaatttctgcg
ctgacattccagaaaggtctgatggcacaagttgtgcccatggaccagtcctttaggaac
tattcaggaatctttcactttaggttctggaggtttggaaagtgggtggatgttgtcatt
gacgaccacctgccaacactcaatggccagctgctctctgtgcgctccaaaggtggaaat
gagttctgggctcctctgctggagaaagcatatgccaaggtgtgtggtacatacgcggac
atgaatgctgggttgccatcagaggcctgcaaggatttctgtggaggtgtgcacatgact
tttgaactcagtcaggtccatgattactcccatgatgacaagctgtggctccaactgagc
agagccactggctgcaagtcgatgatttgctgcggaacagcaccaaaagggggtgagatt
gtgaacaccgtagcaaccactggattggtggatgcacatgcttattctgtcacaggagtc
actgaggtggagctttatggctctaaaaagagactggtgcgatgcatgaacccctggggc
agccaagagtggagcggggattggagtgacaagtcaaaattgtgggacagagtaagccca
gatgatcgggccaagtgttctgaccgcgaagatggagagttctggatggagttggaggac
ttctgtcgctacttcaacatgatgtccatctgctgtgagaaccctaactttttggatggt
gacctcacctgccagtggaagtgcatgatttatgatggcaaatgggaagctggcagaact
gctggtggcagaagcagtaccgggtcctttgcaaagaatcctcagtatcgcatcaatgtg
accaaaataaataagaacgaggagaacgacatgaacatcttgatttctctgatgcagaaa
cctcagctggagggtcgcaaagatgcacaaaaaagatatcatgcaattaacgttagcgtc
tacaaggttccagaagggacacgatcaggccgtctgccttcctccttcttcaacagaaac
agacccatgaacttgagacaaatgtatgcctaccaaagggaaaagattgcggagtacagc
ctggaacttggcgagtatgtgattgtgccctccacctacaaagcccaccagaatgcagaa
tttgttctcaccgtcttctccaaggctgacagcaaaatcaccccccatgaccatgatgat
gatgatgatgatgaccaccaccatagcgatgatgaggacgaagatgttcccaagccatca
actgaccacgatgatgatgacgatgatgacaacgactctgatcgcgccctgttcaagcgc
tatgctgatcagagaggaaacctgagtgccagacagctgcgcaagctcctgaatgacaac
ttcccccatggcacctcttacggcttcggcttggacacctgcaggagcatgattgcaatg
atggatactgaccgcaactggaggatgggcttccctgagttctcaaaactgtggaccaag
atcaatgaatacaagacactcttcaaacgcacagatgtgaacaggaatggatccctgcag
tccggtgaagtcaaggaggcaattaaatctaaaggaatggacgtgaatgatttcatggtg
cagatgatgatgatccgctattcaggctcatacaccaccatggaggacttcattgttctc
atgttgcgcctggacaaaggatcagatattttcaacagcagctcatctgatggagtcatc
accatgagctgggaagagtggaccagcaacatgatgtacaactag
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