Scomber japonicus (chub mackerel): 128370919
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Entry
128370919 CDS
T09718
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04512
ECM-receptor interaction
sjo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128370919
04518 Integrin signaling
128370919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sjo04091
]
128370919
Lectins [BR:
sjo04091
]
C-Type lectins
Lecticans
128370919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
128370919
NCBI-ProteinID:
XP_053187078
LinkDB
All DBs
Position
13:complement(18623868..18698286)
Genome browser
AA seq
3159 aa
AA seq
DB search
MGKGLGITIPKSPRLCLLRDHTDLPKKLFFSHCMCKVTSLDVYLKWYNFHTVTGIVFAQP
DSSGLFYALRSELSEDAILVANNGIRVPFGRSVFIDPINDLVIQTQPGDRCSITVLDNDP
LSQRPGHLSPKKFPCDFGPNDVTYSHYGSRSPAKDRVRLQLRYDAQTETVIIPFMMEVEV
VFTQLELLTKNMPLTVDNLKGMSNPIDKKILEFTYERDSHKCEVTSLSSGSPLPRYGRLI
DGGKLSKMMDCDEFTQADIRYEHTFERKSPNRDYVPMVVELHDKEGNLVKQEYFHLMIRI
KEGEENTPPKPSFVSMMMMEVSQFVMIALTPDMLAAEDAESDPDELIFNITSPLSYEEGY
IVSTDDRNLPITSFYQRDLRDLKITYKPPSLDSDTERIFQLEFEVVDTDGAISDPFAFMI
VVKPMNSLAPVVTRNTGQLLYEGQSRPLFSAHNLEISDEDDLDSVTLTVIDGLRHGDLMV
LGSHRKFFTPADLATGVVVYQHDGSDTYSDNIVFKMTDGKNEVEFLFPITIVPTDDEPPI
INANTGLVLFKNQMMSISPLMLSAADIDSEDSTIKFIIVPPFSTIGTVLLRQSDAPEDPS
SWKFNAEDEMYEKEVTEWLQKDITDGKLFYKHIGPHNTDTVMDQFVFTVQDDNDPPNESG
DNAFIIRVLPIDDVPPELFPGTTLQMTVQEYKLTHFSKEFLRYTDLDSEDRDLKYTVIQP
PTDTDENNPVAFGSLVLTDSLDTEVTEFTQAQINHHKISYAPPDVELGITAHVVQFRYTV
EDTAGNSVEGAFTIYLQPVNNKPPQITNTGFTVLERGMHIITIAELDTTDLDTKSEQITF
TLSQPPKHGQIQAAFTDLEKNGVFKLEDISEGKISYIHGGEETMSDEFQLDVSDGIHVVT
VTVKVNVKPVDDETPTVSLPAGTIGSHMDVLENGATEITTNVIQGHDDDTDDLQLTFIVE
DPPVMGEILVKGVPATRFTQSDIINGVVVYAHTGGEIGLNSQQDGFNLTLTDMSDDWTVG
GNKVNGVHVRVTILPVDSQAPEVGVGIQFSVIEGEKYAIGPQHLNADDNDTPTDDILCTI
IVQPSAGYVENISPAPGSEKSRSGTAISAFTIRDIREGNIYYVQSIHKGVEPVEDRFTFR
CSDGINFSENHFFPIVIIPSNDEKPEIYLREIVVMEGMNIVIDTPILNGADADIPAEELM
FIISKPPKHGAILNQLSTGSVLVTNFTLEQIREASSIIYEHDDSETTEDSFDVTLTDGKY
SVQKTAMVMIIAVDDETPRMAINDGLEVEIGETKEINNKILKATDLDSDDSTLTYIIRFG
PGQGLLHRKTPSGSLENITVGMNFTQAEIDEGVILYTHSGQEGIRDLVKFDVTDGINSLI
DRYFYITVGSIDMVFPDVVSKGVSLKEGGRVTLTTDLLSTTDLNSPDENLAFTITRAPVR
GHLECTDTPGMPIVSFTQLQLAGSKIYYIHTSDDELKMDSFEFEVTDGYNPIFRTFRISI
VDVDNKKPVVTVNGLLVTEGQDKLITPFELTAEDQDTAEKLLKFTVTQLPVHGKLLYNHS
RPVTSFTKQDLNENLISYKHDGTESSEDSFSFTVTDSTHTDFYVFPDTVFETRRPQIMKI
TIVAMDNGVPQILLNKGAHTLKILATGHLGFPISSKALRAEDRDSSPASLVFHITTQPKH
GYIINLGQGNNSIDTFSQADIDDINICYVLGNEENATSDVFHFSVEDNGGNKLKGQQFRL
DWSWISLEKEYYVVDEEDKFLEVVIRRRGYLGETSFIGIGTQDGSATKDEDFKGKSQRQV
QFNPGQTSAMWRVRILTDGKYEQAETFQILLSEPVMGVLEFPATATVEILDPNDESTVFF
PEQIHSVEEDIGELFIPVHRSGDISEELMVVCYTQQGSASGTIPTTVLSYSDYISRPEEH
SSILRFDKGEREKQCRVVIIDDSLYEGEENFNITLSLPVGGRLGMHYPTTKVNILEDMDD
APVFYFGEVEYHVDESDGYVEVKVWRTGTDLSKTGTVTVRSRKAEPLSAEAGIDYVGISR
NLDFAPGVSMQTFRVTILDDLGQPELEGTESFDLVLRMAVNGILGEPGKASVLINDSVSD
LPKVQFREPVYIGEEHDRQISATVYRNGDTRHKSTVRCYTRQGTAQVVSDFDERPNTDAS
IITFLPGEAEKPCILSLVDDTLYEEGEELRLVLGNPKSDSQFGASVGVLNEALVKIKDTA
DKPIIRFVETKFSVSEPKEASAVATVRIPVVRVGDTSKVSIVRVHTKDGSAVSGEDYYPV
SQDIEFKQGDKEHVVEVEVLYDGVREMREAFTLHLKPDENMVAETQVTKVIVYIEETNSM
ADVTFPSLPHVVSLLHYDDVARTPDNLHPPAGYPVICVTACNTKYPDYDKTGSICVSEHI
NNTLTRYRWLISAPAGPDGVTSPMWEVDFDTFFTSSKMITLDSVYFQAGSRVQCAARAVN
SNGDEGLELSSPIVTVSQQEGMCQPRKMGTVGAEPFSAKLRYTGADDPKHPNLIKVTVTM
PHIDGMLPVISTRPLMNFELTLSPDGTRVGNHRCSNLLDYNEVTTGHSFITTSTRNPESM
GDTAPYQFSSPLRGSSTLRFYRNLNLEACLWEFTSYYHMSELLTDCGGTIGTDGQVLNLV
QSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQSELRLTFVYDTAILWKDGIGSPPQAELQG
ALYPTSMRINDQGRLVVNFRTKARFRGLFVESHSGATSMSSMVMSVDHPGLTFNLTLVRS
EPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCTTAQNMEYTVPPVCSPREPVNFDLDIR
FQQVSDPVAVEFSLNTQMFLLSKRSLWLSDGSMGFGQESDIAFSEGDTIYGRVMVDPVQN
LGDSFFCSIEKVFLCTGADGYVPKYNPTKFEFGCLADSPSLLYRFKILDKAQPETQARVF
GDVNFNAVLAVDDPSAMSLVKQPGSDGFRVDSTAMFQVAAGREWYIHTIYTVRSKENANR
GIGKRSLEYHSLVSTSNDLALTLTSSKGHRSRRSVGIEVPEITEDINADNNRGTNIMHIT
LDRTKRRAGGPNELLSDGLEPSELNAEEEEEGLVTVVGALVGVLLTVLIIVTLVLVLRSR
QKDGKEGWREGVQEVVKGSVSTEPMLVVRMQDCHNSSEV
NT seq
9480 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggggctgggtataacaatacctaaatctccaaggctgtgcctgttaagggat
cacacagacctgccgaagaaactcttcttctcacactgcatgtgcaaggtcacctcactt
gatgtatacctcaagtggtacaacttccacacagtaacaggtattgttttcgcgcagcct
gacagctctggattattttacgcactgagatctgaactgtcagaagatgcaatcttggtg
gccaacaacggaatacgtgtgcctttcgggagatccgtcttcatcgatcccatcaatgat
ttggtgatccagacacagccgggagaccggtgcagcatcaccgtcttggataatgatccg
ctctcacagagaccggggcatctctctcccaaaaagtttccgtgtgatttcggtcccaat
gacgtgacatactcccactacgggtccaggagtccagctaaagacagagtgaggctgcag
ctcaggtatgacgcgcaaactgaaaccgttattatcccgtttatgatggaggttgaggta
gtttttacgcagctagagttactcaccaaaaacatgcctctcactgttgataatctcaaa
gggatgagtaaccccatagataagaagattttagagttcacatatgagagagactctcat
aaatgcgaggtgacgtccctgtcaagcggcagcccgctgcctagatatggaagactcatt
gatgggggcaaactttctaaaatgatggactgcgatgaattcacacaagctgacatccgt
tatgagcacacgtttgagcgcaagtctcccaacagggattatgttcccatggttgtggag
ctgcacgataaggaaggcaacctagtgaaacaggagtatttccatctcatgattcgcatc
aaagagggagaggagaacacgcctcccaagcccagctttgtgtccatgatgatgatggaa
gtcagccagtttgtcatgattgccctcacccctgatatgctcgctgctgaggatgcagag
tcagacccagatgaacttattttcaacatcacctctcccttatcttacgaagagggctac
atagtcagcactgatgatagaaatctccccatcacatccttctaccagagagacttgcgt
gatctgaaaataacttacaagcccccctccctggactcagacactgagaggattttccag
cttgagtttgaagtggtagacacagatggggccatctctgacccctttgcttttatgatt
gttgtgaaaccgatgaactctttggccccagttgtgacacgtaacacgggtcagctactg
tatgagggtcagtccaggcctctctttagcgcccacaatttggagatcagtgatgaagat
gacctagatagtgtcaccttaacagtaatagacggcctgcgccacggggacctcatggtg
ttgggttcacacaggaaattcttcacacccgctgaccttgcgacaggggttgttgtgtat
cagcacgatggaagtgacacatacagcgacaacattgtcttcaagatgacggatggtaaa
aatgaagtagaattcctctttcccattacaattgttcccactgatgacgagccacctatt
ataaatgccaacactggccttgtgctatttaaaaaccaaatgatgtctatatctcccctc
atgctcagtgctgccgatattgactctgaggactcaactattaaattcattattgttccc
ccattttccacgattggcactgtgcttctaaggcagtcagatgccccagaggacccctcc
tcctggaagttcaatgctgaggatgaaatgtatgagaaagaagtgacagagtggctgcag
aaagatatcactgatgggaagttgttttacaagcacataggcccccacaacacagacact
gtcatggatcagtttgtgttcacagttcaggatgacaatgacccccctaatgagtcagga
gacaatgcgtttataattagggttttacctatagatgatgtaccccctgagcttttccct
ggcaccacgctgcaaatgactgttcaggagtacaagcttacacactttagcaaagaattt
ctgcgctacacagatttggactctgaggaccgtgacctcaaatatacagttattcagcct
cccacagacacagatgaaaataacccagttgcgttcggctctttggtcctgacagacagc
ctcgacacagaagtcactgagttcacacaagctcaaattaatcaccacaaaatctcctat
gcccccccagatgttgaactcggaataacagcccatgttgtacagtttcgttatactgtt
gaagacacggctgggaacagcgtagagggggctttcactatctacctccaaccggtcaac
aacaaaccccctcagattactaacacgggcttcacagtgcttgaacgtgggatgcacatc
atcactatcgctgagcttgataccacagacctcgacacaaagagtgaacagattaccttt
acacttagccaacctcctaaacatggccagatccaggcagcattcacagacctagagaaa
aatggggttttcaaactcgaggatatctcagaggggaaaatatcatatattcatggaggg
gaggagacgatgagtgacgaatttcagctggatgtcagtgatgggattcatgttgtaacc
gtgacagtcaaagtcaatgtaaagcctgtcgatgatgaaacaccaactgtcagtttgcct
gcgggaacaattgggtctcatatggatgtgctggaaaacggagccacagaaatcacaact
aatgtcattcaaggccatgatgatgacacagatgacctccagctgacctttattgtagaa
gatcccccagttatgggtgaaatcttggttaaaggagtgcctgccactaggtttacacag
tctgatattattaacggtgtggttgtgtatgcacacacaggtggtgagatcggtctcaac
tctcagcaggatggttttaatttgactctgacagacatgtctgatgattggacagtaggt
ggcaataaggtcaatggagtccacgttcgagttactattctccctgttgacagccaggcc
cctgaggttggagttgggattcaattcagcgtcattgaaggggagaaatacgctatcggc
cctcagcacttgaatgcagatgataatgacactccaacggatgatatcctttgcaccatc
attgtccaaccttctgccggttatgtggaaaatatatcacctgccccaggctcagaaaag
tccaggtcagggacagctatcagtgcttttaccatcagagacatcagggagggaaatatc
tattatgtgcagagtattcacaaaggggtagagccagtggaggacaggttcacatttagg
tgctctgatggcataaatttctcagaaaaccattttttcccaattgttatcatcccttca
aatgatgaaaagccagagatttatttgagggagatagttgtgatggaggggatgaacatt
gtcatcgacactccgattctgaacggggccgatgccgatatcccagctgaggagctgatg
tttataatttccaaacctcccaaacatggtgccattttaaatcagctatccacaggttct
gttttggtgactaatttcactttagagcagattagggaggcatcaagcattatttatgag
catgatgactcagagacaacagaggacagctttgatgtcactctgacggatgggaagtac
tctgtgcagaaaacagccatggttatgattattgctgttgatgacgagacccccagaatg
gcaatcaacgatggcctagaggtagaaataggagagaccaaagaaatcaacaacaaaata
ctcaaagcaacagatttagattctgatgatagtacgctcacatatattatacggtttggg
cccggtcagggtctcctgcataggaaaaccccatctgggtctctggagaacatcacagta
ggcatgaatttcacacaagctgaaatcgatgaaggggttatactttacacacacagtgga
caagagggtattagggacttggtcaaatttgatgtcacagatggaattaactcactaatt
gatcgttacttctacattactgtgggcagtattgacatggtcttccctgatgtggtcagt
aaaggcgtgtctctgaaagaaggtggccgtgtgactttgaccacagatcttctcagcact
acagaccttaacagccctgatgagaacctggccttcaccatcacaagggcaccggttagg
ggccacttggagtgcacagatactcctggcatgcctatcgtgtcttttactcaactccaa
ctcgctggcagtaagatctactacatccacacctcggatgatgaattgaaaatggacagt
tttgagtttgaagttactgatggctacaatcctattttcagaacattcagaatctctatt
gtggatgttgacaataagaaacctgttgtgactgtaaatggtctgcttgtcacagaagga
caagataagctgattacaccatttgaactcactgctgaggaccaagacacagctgagaag
ctgctaaaattcactgtcacccagctgcctgttcatggtaaactcctctacaaccattcc
aggcctgtcactagcttcactaaacaagacctcaatgaaaacctcattagctacaaacat
gatggaacagaatcatcagaggactccttctcttttacagtcactgatagcacacacact
gacttttatgttttccctgacactgtttttgagactcggcgccctcaaatcatgaagatc
accattgtggcaatggacaacggtgtcccccagattcttctgaataaaggtgcccacact
ttgaagattttggccacaggtcacctgggattccccatcagctccaaagcgctaagagca
gaggacagagacagcagcccagcctccctagtgttccacatcactacccagcccaaacat
ggctacatcattaacctgggacaaggaaacaactccattgacacatttagtcaagctgat
attgatgacatcaacatctgctatgttttggggaatgaagaaaatgctacatctgatgtc
ttccacttctccgttgaggataacggtggtaacaagctgaagggacagcagttccgtctg
gactggtcctggatctctctggagaaagagtactatgtggtggacgaggaggacaagttc
ctggaggtggtcatcagaaggagaggctacctgggagagacgtctttcataggcattggc
acccaggatggtagtgcaacgaaagatgaggatttcaagggtaagtcccagaggcaggtc
cagttcaacccgggacagacaagcgccatgtggagggttcggatcctgactgatgggaag
tacgagcaggcggagaccttccagattttgctatcggagccagtgatgggagtgctggag
ttccctgctacagcaacagttgagatcctggatcccaatgatgagtcgactgtgttcttc
cctgaacagatccactcagtagaggaggatattggggagcttttcatcccagtgcaccgc
agtggagacatcagtgaggagctcatggtggtctgctacactcagcagggctctgcctca
gggacaattcccacaaccgtcctgtcttactctgactacatatcccgccccgaagagcat
agcagcatccttcgtttcgacaagggtgagagggagaagcagtgtcgcgtggttatcatt
gatgactctttgtacgagggagaagagaatttcaacatcacactgtcactgcctgtcggg
gggcgtctgggaatgcactaccccaccaccaaagtcaatatcttggaagacatggatgat
gccccagtgttttacttcggagaggtggagtatcatgtggatgagagtgatggatatgta
gaggtcaaagtgtggaggacaggaactgatctttctaaaactggcactgtcactgttcgc
tcccgcaaggccgagcctctctcagcagaagccggtattgactacgtgggcattagccgt
aaccttgactttgctccgggcgtcagcatgcagacgttcagggtcaccattctggatgac
ctgggacagccggagctggaggggactgagagctttgacctggtcctacgtatggcagtg
aatggcatcctaggagaacctgggaaggcttcagtcttaatcaatgactctgtgtctgac
ttgcccaaggtccagttccgtgagccggtgtacattggagaagagcacgaccgtcagatc
tcagccacagtgtaccgcaatggtgacaccagacacaaatctactgtccgctgttacacc
cgtcagggcactgcacaggttgtctctgactttgacgagcgacctaatacagatgcatcc
atcatcactttcttaccaggtgaggcagagaagccgtgtattctgtcactggttgatgac
acactgtacgaggaaggagaagagctgcggttggtcttaggaaatccgaaaagtgattca
cagtttggtgcatcagtgggagttttgaatgaggcactggttaaaatcaaggacacagct
gacaaacccatcatccgttttgtggaaaccaagttcagtgttagtgaacccaaggaggcc
agcgccgtggcaactgtgagaatccctgtggttcgagtgggtgacacatcaaaggtatcc
attgttcgtgttcacaccaaagatgggtcagcagtctcaggagaggactactaccccgtg
tcccaagacattgagttcaaacagggcgacaaggaacatgtagtggaggtggaggtgctg
tacgatggggtcagagagatgagggaagcctttactcttcacctgaagcctgatgaaaat
atggtggctgaaactcaggtaactaaagtgatagtttacattgaggagaccaacagcatg
gctgatgtcaccttcccctctctgcctcatgtggtgtcgctactccattacgatgatgtc
gccagaacaccagataatctccacccaccagctggttaccccgtcatctgtgtcacagct
tgcaacacaaaatacccagactatgacaagacgggctctatctgtgtcagcgagcacatc
aacaacaccttgacccgctaccgctggctcatcagtgccccagctggccctgatggcgtc
accagtcccatgtgggaggtggactttgacactttctttacatcctccaagatgatcaca
ttggactcggtctacttccaagcagggtccagggttcagtgtgctgctagggctgttaat
tctaacggggatgaaggtttagagctcagcagccccattgtcactgtcagccagcaggaa
ggtatgtgtcaaccacgtaaaatgggtaccgttggcgctgagcctttctctgccaagcta
cgctacactggagcagacgacccgaaacaccccaacctcatcaaagtgactgtcaccatg
cctcacatagatggcatgcttccagtaatctccactcgccctctcatgaactttgagctg
actctcagtcccgatggtacccgggttggaaaccaccgctgctccaacctgcttgactac
aatgaggtcaccacaggtcacagcttcatcaccacttcaacgcgcaaccctgaaagtatg
ggagacacagcgccctatcagttcagtagccctctgcgggggagcagcacactgcgcttc
tacaggaatctcaacctggaggcctgtctctgggagttcaccagctactatcacatgtct
gagctgctcaccgactgcggaggcaccatagggactgatggacaggtgctgaacctggtc
cagtcttacgtgaccctgcgggtgcctctttatgtttcatacgtgttccactctcctgtc
ggcaccggtggctggcagcattttgacctacagtcagagctgcgcctcacttttgtatac
gatacagccatcctctggaaagatggaatcggtagccctccacaggccgagctacaaggt
gcgttgtatcctaccagtatgcgcatcaatgaccagggacgtttggtggtaaattttcgc
accaaggctcgtttcaggggtttgtttgtggagtctcactctggagcaacctcaatgtca
tccatggtgatgagtgtggaccaccccggcctgacctttaatctcaccttagtgaggagt
gaacctacttacaaccagccagtccagcagtggacctttacctctgactttgctgtgaga
gactactcagggacctacacagtgaagcttatcccatgtacaactgcacagaatatggaa
tacactgttccaccagtctgcagtcccagagaaccagtcaactttgacctagacatcaga
ttccagcaagtgagtgacccagttgcagtggagttcagtctgaacactcagatgttcttg
ttgtccaagaggagcttgtggctctctgatggctccatgggttttggtcaggaaagtgac
atagccttttctgagggtgataccatctacggtcgtgtcatggtggaccccgtgcagaac
ttgggagactctttcttctgtagcatagagaaggtgttcctctgcacaggtgctgatgga
tatgtaccgaagtacaacccaaccaagtttgaatttggctgcctggctgactctccgtca
ttgctctatagattcaaaattcttgacaaagctcagccagagactcaggcacgtgtgttt
ggtgatgtcaattttaatgctgtgctggcagtcgatgatccatcagccatgtccctcgtc
aaacagccagggtctgacggctttagagtggactctacagccatgttccaggttgctgct
ggtcgtgagtggtacatacacaccatttacacagttcgttccaaagagaatgccaacaga
ggtattggaaagcggagcctggaataccactccttagtttccacaagcaatgatcttgcc
ttgaccctaacaagcagcaaaggtcatcgctccaggaggtcagttggcattgaagtccca
gagatcactgaggatatcaatgcagacaacaaccgaggcaccaatatcatgcacatcact
ttggaccgcaccaagcgacgggcaggggggccgaatgagcttctctctgacgggctggaa
cctagtgagctgaatgcagaggaggaagaagagggcctggtgactgtggtgggggcgctg
gtaggggtgctgttgactgtcctcatcattgtcacccttgtgcttgtgctgagatccaga
cagaaggatggtaaggaaggatggagagagggcgtgcaggaggtggtgaaagggtctgtt
agtacagaacccatgttggtggtcaggatgcaagactgccataacagctcagaggtctga
DBGET
integrated database retrieval system
