Scomber japonicus (chub mackerel): 128370920
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Entry
128370920 CDS
T09718
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128370920 (trpc4a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128370920 (trpc4a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
128370920
NCBI-ProteinID:
XP_053187079
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All DBs
Position
13:18758874..18776353
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AA seq
973 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELVLSFNVYIGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEEGNSDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFFTCVFIGLLYPLFAICYLIVPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDERGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
PPFNIIPSPKSFWYLMCWIKKRVCQRTHSKRPETFGTLGRRAAENLRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMVKTGKPALQGERKASASSVES
SLAYPNASLKVSPCPPSSQAKSKLNRFKITTSILKQCSSTTSPRPPEAFNGLPNGLLALV
SDESSSEKSSQRRNFPKDITDFGLFQKRHWGSNEATSGAGENSRKMYSLSEEEGESVGSD
REEQDREHTTMSKDEKGLLEMEKKEVATAIEAPNEKREQDGGEKETEDKDKESTSHSDSV
ADGCFSGSSSEDA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactaccggcggactgacagctcctcgtaccgggaccgcatcccgctg
agaatagtacgggctgagtcagagctgtcaccgctggagaaggcctaccttggagctgtg
gagaagggggactatgctagtgtcaaacaggctcttgaggaggcagagatctacttcaag
atcaacatcaactgcatcgaccctcttggccgcacagctctgctgattgccattgagaac
gagaacctagaaatcattgagctcgtactgagcttcaacgtctacatcggcgatgccctc
ctacatgctattcgtaaggaagtggtgggggctgtggagctgctgctaaatcacaagaag
cctagtggcggcatgcaggttcctccaatcttattggacaagcagttctctgacttcacc
cccgacatcactcccatcatcctcgctgcacacaccaacaactatgaaattatcaagctg
ctggtgcagaaaggagtgtctatgccgcagccacatgaggtgcgctgtaactgtgtggag
tgtgtttctagctcagacgtggacagcctgcggcactcgcgctcacgcctcaacatctac
aaagctctgtcgagtccatcactaattgcactctccagtgaggatcccttcctcactgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtagagaatgagttcaaatcagag
tatgaggagctgtctcagcagtgcaaacagtttgccaaggacctcttggaccagacaagg
agttccagagagctggagatgatcctcaactacagagatgacatcaacttattggaggaa
gagggcaacagtgacctggcaagactcaaactagctataaagtaccaccaaaaagagttt
gtagcgcagccaaactgccagcagctcttggcatcacgctggtatgatgagttccctggc
tggagacggcgccactgggcagggaagttcttcacctgtgttttcatcggcctcctctac
cctttgtttgctatctgctacctcattgttcccaagagtcgttacggcctcttcatccgc
aagcctttcatcaagttcatatgccacacagcgtcctacctgacctttctgttcctgttg
ctcctcgcctcgcaacacattgtcaccacagagcaggacaggcaggacaggcagggcccc
gcaccaaccactgtggagtggatgatcctgccctgggtgctgggattcatctgggcagag
atcaagcaaatgtgggatggtggtttccaagactatgtacacgactggtggaacctgatg
gactttgtcatgaactctttatacctggccaccatctccctcaagattgtagcctacact
aagtacagtggcagtaaacccaggaaccagtgggagatgtggcacccaacactagtagct
gaggcagtgtttgccatagccaacattttcagctccctgcgtctcatctcactgttcaca
gccaactctcatctggggcctctgcagatctctctggggagaatgcttctagacattttg
aagttcctcttcatctactgtctggtcctactggccttcgctaatggactcaaccagctg
tacttttactatgagaccaaggcttcagatgagaggggcaaatgcaagggtatccgatgt
gtagaacagaataacgctttctccacgttatttgagaccctgcagtctctcttctggtct
atttttggtctgatcagcctgtatgtgaccaatgtcgacgcggaccatcagttcactgag
tttgtcggcgccaccatgttcggcacctataacatcatctcactggtggtgctcctcaac
atgctcatagccatgatgaacaactcctaccagcacattgctgatcatgcagacattgag
tggaagtttgccaggacaaagttgtggatgagttactttgaagaaggggccactctgccg
cccccattcaacatcattcccagccccaaatcattctggtacctcatgtgctggattaag
aagcgggtgtgccagaggacgcactctaagcgccctgaaacctttggaacacttgggagg
cgagcagcggagaacctgaggataaaccatcagtatcaggaggtactgagaaacttggtg
aaacgttatgttgctgccatgatcagagatgccaagacagaggaaggcctgactgaagag
aactttaaggagctgaaacaagatatctccagttttcgttatgaggtgatgggcatggtg
aagacagggaaacctgctctacagggggaaagaaaggccagtgccagctcagtggagtcc
agtcttgcttaccccaatgcctcactcaaggtttctccctgtccaccgagtagccaggca
aaaagcaaactcaaccgattcaagatcaccacatccatcctcaaacagtgcagttcgaca
acctcaccgaggccaccagaagccttcaacggtctacctaacggactcttggcactggtc
tctgatgagagctccagtgaaaagtcaagccagagaagaaacttccccaaagatatcact
gactttggcttgttccagaaacgccactggggtagcaacgaagccacgtcaggcgctgga
gagaattctagaaagatgtactctttgtctgaggaagaaggggaatctgtgggctcagac
agagaggagcaggacagagagcacacaacaatgagtaaggatgagaaaggactcctggag
atggaaaagaaggaagtggctacagcgattgaggccccaaatgaaaaaagagagcaggat
ggtggagaaaaagaaaccgaggataaagacaaagagagcacatcccacagtgactccgta
gctgatggatgtttttctgggtcatccagtgaagatgcataa
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