Scomber japonicus (chub mackerel): 128370956
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Entry
128370956 CDS
T09718
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128370956 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128370956 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128370956 (sptbn4a)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128370956 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
128370956 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
128370956
NCBI-ProteinID:
XP_053187115
LinkDB
All DBs
Position
13:26851200..26873772
Genome browser
AA seq
1528 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRPVVQQK
LEEIRECWSDLETTTKAKARQLFENNKPEPAVKSYSDLDNQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGLMAGDREGGEQSGVVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPVASCKDYGNNLQNVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLEAERRSVMLDATL
QSQQYYTEAAKVESWLSGQKLHLVNEEKGTDESSTLQLLKAHLALEQTVETYAETVGMLS
QQCQRLLELGHPDSEQLTKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEK
WITERESVASSTDLGQDLEDVTVLQEKFTKFASETNNVGQQRMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAGQLRTIYAGEKAEAIMVKEQEVM
EAWKELLSSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALEVMMR
QHQELKAKIDGRSKTIQQCADLGKILIAAGNPASEEIKEKLDSLLAKQRDLVEKWDKHQE
KLLRKQEKFQFAQETVKAEAWLKAKEPLITSREPEGGEAQAQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEKKTPLSSRRMFPLSCLTPVPSTSTTSSFLRQTVQAHM
ESKPLQTSLDLGATPATQRLSSSLASYNPVINGSGYHGLEQQCSAKLVGSSYLGMNHQVT
GGGSDSGFSALTSHSGGGDTSTYLGINHQTVGSAESSGYYGMTTGCVGGSGHSMQNHLAS
GIIGSSGNLAQQQCSGGMGSPSFLPHQNMGSSGYLAQPQNVVSSGYLGHPPNLGSTGYLA
QQPNMGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLAQNYQGSGGMGSSSYLAQNHYSSGS
LGSSGYLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAVNPLLEASRVQREQFGDIPM
ADMVGPESGLDLLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQARLNELPL
IVRQERYRRRLERQSSSEQEGSGKQRLQRQDSSDLEGSVKEGSDKRSGEKRSTMAEIVEQ
VQEREAATARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEETRRSRSAPAT
GAPTTPQPPSHTAQNEGFLYRKKATSTDLEAQQRSPNSKSWVNVYCVLKEGMLTFYKDAK
NHTATYNGEPPVDLMNSSFDPSLGYKKKKNVFILKMNDGNNFVFHAKDEEDLKAWTSNIT
TCISEHEAMVIWDKPGTSALDPDRSERKEKSEGDADARSERSEVVEGEERSEKERSEKGD
GSDKLDTSEIADKMEGGAGGSSTSGKSK
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggcccgagacacggcgcgggatgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcagaactggcccgcaataaggaatggctcgccaagatagaa
caggagggtcaggagctgatccaggagaagccggagctgcgtccggtcgtgcagcagaag
ctggaggagatcagagagtgctggtccgacctggagaccaccaccaaggcgaaggcccgc
cagctctttgagaacaacaagcccgagcccgcggtgaagagctactcggacctggacaac
caactctcccacttggagcagcagcccccccagctggaacaggctcaccatctgcccacc
ttcaatgagcagctccagaaattccaggctatggagtctcagataggggacttttacaag
gatgtgggagaactgggaagcttgcagggggtctgcctaccccagcgagggctgatggca
ggtgacagggaaggcggcgagcagtcaggcgtggttgagacccgcatcgtccgcctcatt
gagcccctgaaggagagacgccgcatcctgctggcctccaaagagatgcaccaagtcgcc
caggacctggaggatgagatactgtggattcaggagcggcttcctgtggcctcctgtaaa
gattatgggaataacctccaaaatgtccagcagcatgtaaaaaagaaccagactctccag
agggagctgacggggcgacgggcacgtgttgaggaggttctggaccgggcggggattatc
gcttcgctgcgcactccagaggtggagtttgtgcgtgaaggggcggggcacgtgcgccag
ctgtgggaggtgctgcagctggaggcagaaaggaggtccgtgatgctggacgccacgctg
cagtctcagcagtactacacggaggcagctaaagtggagtcctggctgtcaggtcagaag
ctccatctggtcaatgaagaaaaaggcacggatgagtcaagcaccctgcagctgctgaag
gcccacctggccttagagcaaactgtggaaacatatgcagagacagtaggcatgctctcc
cagcaatgtcagcgcctactggaactgggacaccctgacagtgagcagctcaccaagcag
cagtcccacatagaccggctgtatgtgtccctgaaggacatggtagagcacaggaagacc
aagctggagcagcagtactggctctatcagctcaacaaagaggtggaggagctagagaag
tggatcactgagcgcgagtcagtggccagttccactgacttgggccaagaccttgaggat
gtcacggtacttcaggagaagttcaccaagtttgcctcagaaaccaacaacgtcggccag
cagcggatggagcaggtgaacaaaatggtcaacgagatgatcgactgcggccactcggac
gccgccaccatcgccgaatggaaggacggactgaacgagtcctgggccgacctcctggag
ctgatggagacccgcaggcagatgctggcagcgtcccaccagctgcacaagttcttcacc
gactgtaaagaggtcttggctcagatcgcggggaagatgaagcagctgccagaggtgagg
gcatgccaagccaacatcaccaatccagccaccctgcagagactcatgcactcctttgag
catgcccttcaactgctagttgcacaggtaaggcagctgcaggagaacgctggccagctg
aggaccatctacgctggtgagaaagctgaggccatcatggtgaaagagcaggaagtgatg
gaggcgtggaaggagctgctcagctcttgtgaggccagtcgtgtccaggtgacttcagta
accgacaaggtgcagttcttctccgtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagattggatgggatgagcccagagatttaacagctcttgaggtgatgatgagg
cagcatcaggagctgaaagccaaaatagacggccgcagcaagaccattcagcagtgcgca
gatctcggcaagatcctgatcgctgcgggcaaccctgcgtcagaggagataaaagagaag
ttggacagccttctggctaagcagagggatcttgttgagaaatgggacaaacaccaggag
aagttactgcgcaagcaggaaaagttccagttcgcccaggagacggtaaaggcggaagcc
tggctgaaggccaaggagccgctgatcacctccagggagccagaaggaggagaggcccag
gcccaaactgatgaggttgagcagctcatccttcgccacgaggccttccgcaaggctgct
gtaacctggaaagaacgcttcagctcactccgccagctttccgcagctgagaagaaaaaa
gaggaggagaaaaagaccccactctccagccgaaggatgttcccgttatcttgtctgact
cccgttccctcaaccagtactacctcatctttcttgaggcagacggtacaagctcatatg
gaatccaaacccttgcagaccagtctggatctgggtgccaccccagcaacccagagattg
tcttcatcgcttgccagctacaacccagtcataaatggatcaggctaccatggactggag
caacagtgcagtgcaaagttggtgggctcctcctacctcgggatgaaccatcaggtgact
ggaggtggaagtgactccgggttttcagcgctgacctcccacagtggtggaggagacact
tctacctaccttgggataaaccatcaaactgttggcagtgcagagagctccgggtactat
ggaatgactactgggtgtgtgggtggctctggccactcaatgcaaaaccatctagccagt
ggcattataggaagttcaggtaacctagctcagcagcaatgcagtggaggtatgggaagc
ccaagtttcctgcctcatcagaatatgggaagttctgggtatttagcacaaccacaaaat
gtggtaagttctggatacttgggacacccgcctaatttggggagtacaggatatttggca
caacagcctaatatggggagtactgggtatttggcacaacagcctaatatggggagtact
gggtatttggcacaacagcctaatatggggagtactggctacctagcgcagaattatcag
ggcagtggaggaatgggtagctcaagctatctggcacaaaatcattacagtagtggaagt
ctgggcagttctggttacttggcgcagagtggtggcatcatggacccgaaaatggcatat
gcatggcagcacctgaaagctgacttcatgcagcccaggatcaaccacatccacaaggct
gtaaatcccctactagaagctagcagagtgcaacgagaacagtttggggacatcccaatg
gcagacatggtggggccagagtcagggctggacctcctccacggccgtctccagagggat
ccacgtggcagccgctctgacccccagatggaccatctgaggcgagagagggagtacaag
ctgggtagacagacctccagcgaacaggagatccaagccaggctgaacgagctgccgctg
attgtgcgtcaggagcgctacaggagacgcctggagaggcagtcgtccagtgaacaagag
gggagtggcaagcagaggctgcagagacaagactccagtgacctggagggctctgttaaa
gagggctctgacaaacgctcaggggagaagagatctaccatggcagagattgtagaacag
gtccaggagagagaggcggcaactgcacgaggagagccttaccggcctcctagcagcctc
tcagcacctgtaactcgttttgacggacgcccccgcgccagagaccgccccaaaccaagg
aggaggccccgtccaaaagagcctgaggagacacggcgttctcgctccgccccagctacc
ggtgccccgacaacaccccagccaccttcacacactgcccaaaacgaaggctttctgtat
cgcaaaaaggccaccagtactgaccttgaagctcaacagaggagccccaacagcaagtcc
tgggtgaacgtatactgtgtgctgaaagagggaatgctgaccttctataaggatgctaag
aaccacaccgcgacctacaacggagagcctcccgttgaccttatgaactcctcatttgat
ccctcgctgggatacaagaagaagaaaaatgtcttcattcttaaaatgaatgacggaaac
aactttgtgttccatgcaaaagatgaggaggatcttaaagcctggacttcgaacataacc
acctgtatatctgagcatgaggccatggtcatatgggacaagccaggcacctcagccttg
gaccccgaccgctcggagaggaaggagaagtcggaaggggacgccgacgccaggtcagag
agatcggaggtcgtggaaggggaggagaggtctgagaaggagaggtcagagaaaggggac
ggctctgataagctagacacatcagaaatcgctgacaagatggagggcggggcagggggc
tccagcacgtctggaaagagcaaatga
DBGET
integrated database retrieval system
