Scomber japonicus (chub mackerel): 128370985
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Entry
128370985 CDS
T09718
Symbol
dscama
Name
(RefSeq) Down syndrome cell adhesion molecule a isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128370985 (dscama)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
DSCAM family
128370985 (dscama)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
V-set_CD47
C1-set
C2-set_3
fn3_2
Interfer-bind
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
128370985
NCBI-ProteinID:
XP_053187143
LinkDB
All DBs
Position
13:complement(26316550..26391338)
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AA seq
1893 aa
AA seq
DB search
MRGNVVVFKCIIPASVEAYITVVSWEKDTMSINAEMSRFLITSTGALYILDVQMEDGLYN
YRCMTRHRYTGETRQSNSARLIVSDPTNSAPHILDSFERREVMASHRVELPCKASGHPAP
KYRWLKDNRPLEPDTRFRQSVTGLLIERAQPSDTGSYVCEVWNGYGNAEVVGRLLVKEPL
KVVVSPRKVKGSVGSQVSLSCGVTGSEEYQLSWYRNGELIYPSNSVRMTGQNRENLVMAG
MAKSDGGAYQCFARHGKMSAQDFVQVILEDGTPKILTSFSEKVYNINEFVSLSCTVKGTP
EPRVTWTLDDEPVVRDSRHRISHYTNAEGHVVSHLNISQTQVPDGGVYRCICNNSAGTVS
YQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWYKDSNLLPYNHRQRAFE
NNGTLKLFDVQKDVDEGEYTCNVLVQPQLSTHQSVYVTVKVPPTIHPFEFPRFSIGQRVF
IPCVVMSGDQPVFITWQKDGRPIPASLGVTIDNIDFTSSLRISNLTLMHNGNYTCIARNQ
AAAVEHQSQLIVRVPPKFVVQPKDQDGIYGKAVILNCSAEGYPVPTIQWEYSKGAGVPQF
KPIALNSGFRIEVLVNGSLLIKHVLEEDSGFYLCRVSNDVGADVSKSMYLNVKIPAMITS
YPNTTLATQGEEKKMSCTAHGEKPIMVRWEKEERIINPETSRYVVSFKEVGDEVISTLQI
MPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDRTIALRWTMGFDGN
SPITGFDIESKNKSASWDTAQKTKDVSPQLNQATIIDLHPSSTYNIRMFAKNLIGKSEAS
NELTITTDEAAPDGPPQEVQLEALSSQSIRVSWRSPKKHLQNGAIRGYQVGYREYSSGGN
YQFSVISVETTGDNAESLVLDNLKKFTQYGVVVQASNSAGTGPSSTEVAATTLEDVPSRP
PENVQASATSPEVISLSWLTPPKDALNGNLLGFRVIYWANLPDGELGEIRNVTTSKPSLE
LDGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAAASNSVVFVSWLP
PLKVNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSRNRQYSIWVVAVTAAGRGN
ASEIITVKPMAEAPARILTFNRTVTTPWMRDIVLPCKAVGDPSPTIKWLKEINGTPAPVV
IDSRRSVHGNGSLVIRTVKAEDSGNYTCVASNSFGSDKIVLNLQVQVPPDQPRLTVTKTT
TTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGNFPISPSERSYRLENLKCGTWYKFTL
TAQNAVGPGRISEIIEAKTHGKEPQYSKEQELFTSINVTRVKLNLNGWNNGGCPITSFTL
EYRSVDAPTWTTAQRTSLTKSYILYDLQEATWYELQMKVYNSAGYAEKRVKFATLSYDGS
TIAPLVKAPNVSEDNPGGGEGLKMMVTISCVLVGIVVIFIGLLVLRRRRREQRLKRLRDA
KSLAEMLMSKNTRPAEPINKQQQTLRMHIDIPRAQLLIEERDTMETVDDRSTVLLTDNDF
GETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSKSNPTARRTAKAGPAARNRYAS
QWTLNRPHPPVSSHTLSTDWRLPTPRVAGSVDKESDSYSVSPSQDTDRARSSMVSTESAS
STYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLTSSTPSESGI
CRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGMSCSGSSRGTASG
ERAAMGQACLEPQKSRSLKRPSRMAPPTPTEAPQASRDPVAQWQPGSAATLPHREGSELA
QAAKLSTSQESLLDSRGHLKQSSNPYAKSYTLV
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcaatgtggtggtcttcaagtgcattatccctgcctcagtggaggcctacatc
accgttgtgtcctgggagaaagacacaatgtcaatcaacgctgaaatgtcacggtttctc
atcacatccacgggagccctgtatatcctggatgtgcaaatggaagacgggctgtacaac
tacaggtgtatgacgcgccatcgatacacaggagaaacccgacagagcaatagtgcccgc
ctcattgtctcagatcccacaaactcagcgccccatatcctggacagctttgagcgtcgt
gaggtgatggcgtctcatcgagtggagttaccctgcaaggcctctggtcaccccgcaccc
aaataccgctggctaaaggacaaccggccgctggagcccgacacacgcttcagacagagt
gtgacaggcctgctgatagagagagcccagcccagcgacacgggctcatatgtgtgtgag
gtgtggaacggctacggaaatgctgaagtggttggaaggctgctggtgaaagagcccctg
aaggtagtggtgagcccacggaaggtgaagggcagtgttgggagccaggtttcactgtcc
tgcggtgtaaccggctctgaggagtaccagctgtcctggtatcgcaacggagagctcatc
tacccgagtaacagcgtccgcatgacaggccaaaacagggagaacctagtcatggccggc
atggccaagagcgatggaggagcctatcaatgctttgcccgacatggaaagatgtctgca
caggactttgttcaggtcatactggaagatgggacccccaaaattctgacatcattcagc
gagaaggtctacaacatcaacgagttcgtatcgctgtcgtgcacggtgaagggcacgccg
gaacctcgggtgacgtggactctggatgacgagccagtggtacgggacagccgccaccgc
atctctcactacaccaacgctgagggccacgtggtcagccacctcaacatcagccagacc
caggtcccagatggaggggtgtaccgctgcatctgcaacaactcggccgggaccgtttcc
taccaggcgcgaataaacgtaagagggcctgccagcatcagaccaatgaaaaacctcact
gccatcgctgggcgggacatgtacatccactgccgtgtcattggctacccgtactactcc
atcaaatggtacaaggactccaatttgctgccgtacaaccaccgccagcgggcctttgag
aacaacggcaccctgaagctgtttgatgtgcaaaaggatgtggatgaaggagagtatacg
tgcaacgtgctggtgcagcctcagctctccacacaccagagcgtctatgttactgtgaaa
gtcccacctaccatccacccgttcgagttccctcgcttttccatcggccagcgagtgttc
atcccctgcgtggtcatgtccggcgaccagccagtcttcatcacctggcagaaggacggg
cggccaatcccagccagtctgggcgtcaccatcgacaacatagacttcaccagctccctc
cgtatctccaacctcacgctcatgcacaacggcaactacacctgcattgcacgcaaccag
gccgcagctgtggagcaccagagccagctcatcgtccgagttcctcccaaatttgtggtg
caaccgaaggaccaggatggcatctatggaaaagctgtgatactaaactgctcagctgaa
ggctatcctgttcctaccatccagtgggagtactctaaaggcgccggggtccctcagttc
aaacccatcgccctcaactcaggctttcggatcgaggtgctggtcaacggctctctgctc
atcaaacacgttctggaagaagacagcggcttctacctgtgtcgagtcagcaacgacgtc
ggggccgatgttagcaagtccatgtatctcaatgtcaaaatccctgccatgatcacatcc
taccccaacaccacgctggccacgcagggtgaagagaagaagatgagctgcacggctcac
ggtgagaagcccatcatggtgcgctgggagaaggaggaacgcatcatcaaccctgaaacc
agccgctatgtggtttctttcaaggaggtgggcgatgaagtcatctccactctgcagatc
atgcccacagtaagagaggactctggcttcttctcctgccatgccatcaactcctttggt
gaagacagaggaatcatacagctcacagtacaagagcccccggaccccccagaggtggag
atcagagaagtgaaggacaggactatcgccctgcgttggaccatgggttttgatggcaac
agtccaatcacaggctttgatattgagagcaagaataaatcagcctcctgggatacagct
cagaagaccaaagacgtttcacctcagctcaaccaggccaccatcatcgacctacacccc
tcctccacctacaacatccgcatgttcgccaagaacctgatcggcaagagcgaggccagc
aacgagctcaccatcaccaccgatgaagcagctcctgatggaccacctcaggaagtacag
ctggaagccctctcctctcagagcatccgtgtcagttggaggtcacccaagaaacatctc
cagaatggggctatcagaggctaccaggtgggctacagggagtacagctcaggtggaaac
taccagttcagcgtgatcagcgtggagacaacgggggacaatgcagagagtctggtgctg
gacaacctgaagaagttcacccagtacggagtggtggtgcaagccagcaacagcgctggg
acagggccgtcctccacagaggtggctgctaccacgctggaggacgtgcccagccgtcct
ccagagaacgtccaggcatcagctacgtctccagaggtcatctctctatcatggctgacc
cctcccaaagacgctctgaacggcaacctgctgggctttagggtcatctactgggccaac
ctgcctgatggagagctcggagagatcaggaacgtgacgacctctaaaccctctctggag
ctggatgggctggagaagtacaccaactacagcatccaggtgttggccttcacccgagcc
ggtgacggtgttcgcagcgagcagatttacacccgtaccaaggaggacgttcctggtcct
ccggcgggtgtgaaggcagcagccgcttctaactcggtggtgttcgtgtcctggcttcct
cctctcaaagtgaacggcattatcaggaaatacactgtgttctgctccaacccacacccc
acggtgagcagtgagtttgaggccgccccagatgtgttcttctaccgcatccccaacctg
agcaggaatcggcagtatagcatctgggtggtggccgtcaccgccgcgggtcgtggaaat
gccagcgagatcatcaccgttaaacccatggctgaggctccagctcgaatcctgactttc
aacaggactgtaacgaccccctggatgagggacatcgtgctgccttgtaaggcagtgggt
gatccatcaccaaccatcaagtggttaaaggagatcaatggaaccccggctcctgttgtg
atcgacagccggcgcagcgtccacggtaacggcagcctggtgattcgcacggtgaaagca
gaggattctgggaactacacttgtgtggctagtaacagcttcgggtctgacaagatcgtc
ctcaacctgcaggttcaagttccacctgatcagcctcgcctcacagtgaccaaaacaacc
accacctccataactctgtcctggatccctggagacaacggaggcagctccatcagaggc
tacattctgcagtattcagaggataacagtgagcagtgggggaactttcccatcagtccc
agtgagcgctcctatcgtctggagaacctcaagtgtggcacctggtacaagttcaccctc
actgcccagaatgcagttgggcccggacgcatcagtgagatcatcgaagcaaagactcat
gggaaagaacctcagtactccaaagaacaggagctcttcactagcatcaacgtcactcgc
gtcaagctcaacctgaacggctggaacaacggcgggtgccccatcacctcgttcaccctg
gagtaccgctcagtggacgctcccacctggaccacggctcagcgcacctccctcaccaag
agctacatcctgtacgacctgcaggaggccacctggtacgagctgcagatgaaagtctac
aacagcgccggctacgctgagaagagagtgaagtttgcgacgctcagctacgacggcagt
accattgcacccttggtgaaggcacccaatgtgagtgaggacaaccctggtggaggcgaa
ggattgaagatgatggtgaccatttcctgcgtgttggtgggcatcgttgtgatcttcatc
gggctgctagtgctgaggaggaggaggagggagcagaggctcaagaggctcagagatgca
aaaagtttggctgagatgctgatgagtaaaaacacacgtccagcagagccaattaacaag
cagcaacaaacgctccgaatgcacatcgacatccccagagcccagcttctcattgaggag
agagacaccatggagaccgttgatgacagatctactgtgttactgactgataatgacttc
ggggagacacagaagcagaaatcatccacagtcacccacaccgtccactaccagtccctc
tcccaggccaccggtccgctggtagatgtgtctgatgccagaccaggaaccagtaagtcc
aaccccaccgcccgccgcacagccaaagccggcccagccgcacgaaaccgctacgccagc
cagtggaccctgaaccgcccgcacccccctgtctcctcccacactctcagcactgactgg
aggctgcccacgcccagagtggcaggctctgttgacaaggagagtgacagctacagcgtc
agcccatctcaggacacagaccgcgctcggagcagcatggtgtcgacggagagcgcgtcc
tccacctacgaggaactcgccagagcctatgagcacgcaaagatggaggagcagctgcgc
cacgccaaattcaccatcaccgaatgcttcatctctgacacttcgtcagagcagatgaca
gcaggcaccaacgactacaccgacagcctgacctccagcacaccgtctgaatcgggcata
tgccgcttcactgcttccccgcccaagcctcaggacgtcagccgggtcatgaacatggcc
gtacccaaggcccacagaccggggggcgagctggttcaccttcctccgtacctgcgcatg
gacttcctgttaaaccgaggcatgtcctgctcggggtcatccagggggacagctagtggg
gagagagcagccatgggtcaggcctgtctggagccccagaagagtcgctcactgaagcgg
ccctctcgtatggcgcccccaacgcccacagaggcccctcaggccagcagggacccagtg
gcccagtggcagcctggctcagcagccacgctcccccacagagagggctcggagctggcc
caggccgccaagctcagcacctcccaggagtccctgctggactcgcgaggacatctcaaa
cagagcagcaacccctacgcaaagtcctacacgctggtataa
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