Scomber japonicus (chub mackerel): 128371024
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Entry
128371024 CDS
T09718
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128371024 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128371024 (cnot8)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128371024 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128371024 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
128371024
NCBI-ProteinID:
XP_053187196
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All DBs
Position
13:2478362..2485224
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AA seq
285 aa
AA seq
DB search
MPAALTDSSQIICEVWASNVEEEMRKIRQIIQSYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEHD
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQPQNGLSSSGQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgctctcacagactccagccagatcatctgtgaagtctgggcgagcaacgtg
gaggaagaaatgaggaagatacgacagattatacaaagctacaattatatcgccatggac
acagagttccccggggtggtggtgcggccaatcggagagtttcggagcacggtggattac
cagtaccagctgctgaggtgcaacgtggatctgctgaagatcatccagctcggcctcacc
ttcatgaacgaggacggagattatcctccaggcacgacgacgtggcagttcaacttcaag
ttcaacctcacagaagacatgtactctcaggactccatagacctgctgcagaactccggc
ctccagtttaagaaacatgaagaagaaggaatcgacacgctttacttcgctgagctgctc
atgacgtctggactggtgctgtgtgaaaacgtcaagtggctctccttccacagcggctat
gacttcggttacctggtgaagctgctgacggacgctcggctccctgaagaggaacacgac
ttcttccagatcctcaacctcttcttccccgccatctacgacgtcaagtacttaatgaag
agctgcaagaacctgaagggaggtctgcaggaagtagccgaccagctggagttgaagagg
atcggtcggcagcatcaggccggatcggactctctgctaaccggcatggccttcttcagg
atgaaagagcttttctttgaagacaacatcgatgacgctaagtactgcggcaggttgtac
ggactcggctcgggttccactcagcctcagaacggcctctccagctcgggccaagaggag
accaacaacaagcactga
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