Scomber japonicus (chub mackerel): 128371074
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Entry
128371074 CDS
T09718
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a
KO
K06781
cell adhesion molecule 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128371074 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128371074 (cadm1a)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Nectin family
128371074 (cadm1a)
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GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C1-set
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
128371074
NCBI-ProteinID:
XP_053187250
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All DBs
Position
13:5481131..5931827
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AA seq
426 aa
AA seq
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MFQAALHKGAAQIPVVSQNLVTDNVSVVEGEMAIISCRVKNNDDSVIQLLNPNRQTIYFR
DMRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPPQEAYADITVLIPPGNP
IIEARDEILSEGNETEMTCTAMSSKPAATIKWMKGDKELPGKPKVELSYDKMYTVTSRLT
FTVSKEDDGVPVVCIVDHPAVKDFQAQKYLEVQYKPEVKIVVEFPQGQTREGENLELTCQ
AKGKPQPQRVNWVKVDDDVPSHAVITGADLYIENLNKSYNGTYRCVASNSVGESYDDYIL
HVLDAPTTTPIPTTATTTTTTITTTISYPEASQDTTPSTEPAAHDSRAGEGAPRTVDHAV
IGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHTNSDE
KKEYYI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcggctcttcataaaggagctgcacagatcccagtggtgagtcagaacctg
gtgacagacaatgtgtcggtggtggagggagagatggcgatcatcagctgtcgggtgaag
aacaatgacgactcggttatccagctgctcaaccccaacagacagacaatatacttcaga
gacatgaggccactaaaagatgctcgcttccagctggtgaacttctcagacaacgagctg
cgggtgtcactgtctaatgtctcgctgtcagacgagggtcgatatgtttgccagctctac
acagaccccccgcaggaagcctacgctgacatcaccgtgctaattcccccaggcaacccc
atcatcgaggcccgggatgagatcctgagtgagggtaacgagacagagatgacctgcact
gctatgagcagtaagcctgctgccaccatcaaatggatgaagggagataaggagctccca
ggaaaacccaaagttgagctgtcctacgacaagatgtacacagtaaccagccgactcaca
ttcaccgttagcaaggaggatgatggcgtacctgtggtttgcattgttgaccaccctgca
gtcaaggacttccaagcacagaaatacctggaggtgcaatacaaaccagaagtaaagatc
gtggtagaatttcctcagggtcagacgagggaaggcgagaacctggaactgacgtgtcag
gccaaaggcaaaccccagccacagcgggtcaactgggtgaaggtagatgacgatgtgcca
tcccacgccgtcatcaccggcgccgatctttacatcgaaaacctcaacaagtcctacaac
ggaacctaccgctgtgttgcatccaactcagtgggggagtcttatgacgactacatcctc
cacgtccttgatgctcccaccactacccctatacccaccacagccaccaccaccaccacc
accatcaccaccaccatctcctaccccgaagccagtcaagacaccacgcccagcactgaa
cctgcagctcatgattcacgagctggagagggagcgccaagaacggtggaccatgcagtg
attggaggagtggtagccgtggttgtctttgccatgctctgtctactcatcgttttggga
cgctactttgcaagacacaaaggtacctacttcacacacgaagccaaaggagcagacgac
gcagcggacgcagatacagccatcatcaacgcagagggtgggcacaccaactcggacgaa
aagaaagagtactacatctaa
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