Scomber japonicus (chub mackerel): 128371096
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Entry
128371096 CDS
T09718
Name
(RefSeq) homeobox protein MSH-D-like
KO
K09341
homeobox protein MSX
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128371096
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
128371096
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
LodA_C
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128371096
NCBI-ProteinID:
XP_053187273
LinkDB
All DBs
Position
13:complement(13590303..13591694)
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AA seq
280 aa
AA seq
DB search
MTTQETFKDLGCSSSEEDSNRADLADTPAEEKTSPVVRRHHPFSVEALMSGRKTDGRGEE
STCGTPESGPVVLSPSGLNSLYMCRETCSPPRGSRKSFMASPSSPVKSETSESEDCTPWV
TNSAFSAQPRHINPSCQLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSS
LTLTETQVKIWFQNRRAKAKRLQEAELEKLKMAADAKTAAVAAAAAGALHPGFTLPLSLG
AMSLYGQSYSAYHQQHRPILPISPLGLYAAPLGYSMYHLS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgactactcaggagacttttaaggacttggggtgcagttcgtcggaggaggacagtaac
cgcgcggacttggcagacactccagcagaggagaagacatccccggtggtgcgccggcat
cacccgttcagtgtggaggcgcttatgtccgggaggaagacggacggacgtggcgaagag
tccacctgcggtacaccggagagtggaccggtggtgttgtctccctcaggattaaactct
ctgtatatgtgccgggagacgtgcagtcctcctcggggaagccgaaaaagctttatggct
tcgccttcgtcgccagtaaaatccgaaacatcagaatccgaggattgcacaccatgggtc
accaacagcgcgttttctgcacagccacgtcacatcaatccctcctgtcagttgaggaag
cacaagaccaaccgaaagccccgcactcccttcaccacgtctcaactactggccctggag
aggaagttcagacagaagcagtatctgtcaattgcagagcgggcggagttctcgtcctcc
ttgaccctgacagagacccaggtgaagatctggttccaaaatcgccgggcaaaagccaag
agactccaggaggccgagctggagaaactcaagatggctgctgacgccaagactgcagca
gtggcagctgctgctgctggagctttacaccctggctttacgttaccgctgtcattgggc
gccatgtcattatacggacagtcatactcagcctaccatcagcagcacagacccatactg
cccatttcacctttaggactgtacgctgctcctctgggctacagcatgtaccacttgtcg
taa
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