Scomber japonicus (chub mackerel): 128371101
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Entry
128371101 CDS
T09718
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128371101 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128371101 (zgc:163098)
Spliceosome [BR:
sjo03041
]
Complex A
U2 snRNP components
U2 related factors
128371101 (zgc:163098)
Complex B
128371101 (zgc:163098)
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GFIT
Motif
Pfam:
Surp
cwf21
RRM_1
CID
CTK3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
128371101
NCBI-ProteinID:
XP_053187278
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Position
13:19459271..19470179
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AA seq
885 aa
AA seq
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MADRKGKPVTPVKTLTKKEQEELKKKEEEKAAEVFEEFLASFETSSEKSRVKTFVRGGIV
NATKEEEAAEVKKNKLYRPASKFVPVSQHVSSASSAENKKSSFKRKTEEKKKSNLELFKE
ELKLIQEEREERHKRKKNDPVGGGGGGGGYGDVDIPLSGRSTLYDDLTVPTTTNLYISCI
SPKMNEELLCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALAALDGK
VIMGFEMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSK
GELDKTLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAMIMNKEKNNPDYRFLFDN
KSQDHVYYRWKLFTVLQGESLTEWRTTDFRMFRGGSIWRPPVLNNYSQRGEEKAEVEEEA
SPEEEVKKGQLRAEHRQRLETLVKELTPSREDIANAMLFCLERADAAEEVVAHVTESFSL
LQTPLQKKIARLYLVSDILHNSCAKVAGASYYRKYFETKLMQIFGDLNSAHKNIQARLQA
EQFKQKVMSCFRAWEDWAIYPEPYLIHLQNIFLGFAKVGEESIEAAEEVSSDLDGAPMDS
SLIDGLPLDRASAEDLDGCPLGWDPLDGVPVDDIDGVPLGAAIDDIDGMPLDDSNAPLSR
VPLSKWEKTGDTATFSQANTESKWDTVVEPGSEDEVNVSVNSQDGDEDSDSDSSDDSCSL
SKYDSADFQSSLRSFQMSESKRKRLRELEVKVMKFQDELESGKRQRKSGMSIQQQVAHYR
NKLLQKEFENDEEKNERSTLKSKDRSKDDRKDKERSKRSEDGERRRGHSRDSDEQTRQSR
SISPLKTKSPKWSKRSRSPSPDRKARKSRSRSPHRSHKKTKKSKH
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaaagggaaaacctgtcactccagtcaaaacactaacaaaaaaagaacaa
gaagagctcaagaagaaggaagaagaaaaagcagcagaagtttttgaagaatttttggca
tcatttgagacatcgagtgagaaaagcagagtgaaaacctttgtgcgtgggggtatcgtg
aatgcaactaaagaggaggaagcagcagaggtcaagaaaaataagctgtatcgtcctgcc
tcaaagtttgtccctgtgtcccagcatgtctcgtcagcatcgtctgctgaaaacaaaaag
tctagttttaaaagaaagacggaagaaaagaagaagagtaacctcgaactctttaaagaa
gaacttaagctaatacaagaagagcgagaggaaagacacaaaaggaagaaaaatgaccct
gtcggaggaggaggaggagggggagggtatggagatgtggacataccattatcaggacga
tcaacactttatgatgacttaacagtgccaaccaccactaacctctacattagctgcatt
agcccaaagatgaacgaggagttgctctgcaaagagtttggtaagtatggtcccctggcc
agtgtgaagataatgtggccccgaacagacgaggagcgctgccggacttccaacagagcc
tttgtggctttcatgacacggaaagatgcagagagagctttggctgcgcttgatggtaaa
gtgattatgggatttgaaatgaagctgggatggggtaaaccagctcgcattccacctcag
cctctctacacaccggtgggggtgagggccacaccaccacccccatctggtctgcctttc
aatgctcagccaagggatcgcttccgtaatgacttcaccaagccgctgggcatgtctaaa
ggggagcttgacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaagg
aatttattattcctcattcacagaatgatagagtttgtggtgcgtgaagggcccgttttt
gaagccatgataatgaacaaggaaaaaaacaaccccgattacaggtttcttttcgacaac
aaaagtcaagatcacgtgtactatcgctggaaactatttactgtcctccagggagaatcc
ctaaccgagtggaggaccacagattttcgcatgtttcggggcggctccatctggagaccc
cctgtcctaaacaactactcacagagaggtgaagagaaggcagaagtggaggaggaagct
tcccctgaggaagaggtgaagaaagggcagctcagagccgagcacagacagagactggag
acgctggttaaagagctcaccccaagcagagaagatatcgccaatgccatgctgttctgt
ctcgagcgagcagatgcagcagaggaagtggtggcacacgtcactgagtctttttcattg
cttcagacacccctgcagaagaagattgccagattgtaccttgtgtcagacatcttgcat
aattcgtgtgccaaagtagccggtgcctcatattatcgtaaatattttgaaacaaagcta
atgcagatatttggagatcttaattcagcgcacaaaaacatacaagccaggctacaggct
gaacaatttaagcaaaaggttatgagttgttttagagcatgggaggactgggccatatac
ccggagccttatctaatccaccttcaaaacatcttcctgggctttgccaaagtaggggag
gagtcgatagaggcggcagaggaagtatcctctgatctcgacggtgcgccaatggacagc
tcacttatagatgggttacctttagacagagcttctgcagaagacctggatggctgcccc
ctgggatgggaccctctggatggagtccctgttgatgacatagatggtgttcctttagga
gccgccatagacgacattgatggaatgcccttggatgacagcaacgcgcctctctccaga
gtgcctttgtctaagtgggagaagacaggtgatactgcaacattttctcaagccaacact
gagtctaagtgggacactgtggtcgagcctggcagtgaggatgaagtgaatgtaagtgtc
aactcacaggacggagatgaggactcagacagtgacagcagtgatgactcctgcagtttg
tccaaatatgacagtgcagacttccagagctccctcagaagttttcaaatgtcagagagc
aaaaggaaaaggttgagagagctggaggtgaaggttatgaagtttcaagatgagctggaa
tctggaaaaaggcagaggaagtcagggatgagcattcaacaacaggtggcacactacagg
aacaaactgttacagaaggagtttgaaaatgatgaagaaaagaatgaaagatcgacactg
aagtctaaagacagatcgaaggatgacagaaaagacaaagagaggagcaaaagaagtgag
gacggggaacgaagacgaggacatagcagagattctgacgagcagacacgacaatcgagg
agcatctctcccttaaagacaaagtctcccaaatggtccaaacggtcacgatcaccatct
ccagaccggaaggcacggaagtccaggtcacgctcaccacatcgctcccacaagaagaca
aagaagagtaaacactga
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