Scomber japonicus (chub mackerel): 128371245
Help
Entry
128371245 CDS
T09718
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128371245 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128371245 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128371245 (vps36)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
128371245 (vps36)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128371245 (vps36)
Exosomal proteins of colorectal cancer cells
128371245 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
128371245
NCBI-ProteinID:
XP_053187485
LinkDB
All DBs
Position
13:17905454..17913162
Genome browser
AA seq
382 aa
AA seq
DB search
MDRFSWSSGLLEINETLVIQQRGVKLYDGDEKAKLDVGVALLSTHQLIWRDVKSHECCIA
MPLSQIIFFEEQAAGIGKSAKIVIHLHPVPANKEPGPYQHSKYSHIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVSQPIPTGTGPQAGRTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVEVSRSIANKIKDKQGDITEDETIRFKSYLLSMGIADPVTRETHGSGTH
YHLQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACRMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttttcgtggtctagtgggcttctagaaataaacgaaactttagtgattcaa
cagcgaggtgtcaaactgtatgacggtgatgaaaaggctaagctggatgttggagtcgcc
ttgttgagcacccatcagttgatctggagggatgtaaaaagtcatgagtgctgcattgcc
atgcccctgtctcagatcatcttctttgaggagcaggctgcaggaataggaaagagtgca
aaaatagttattcacctgcatccagtacctgccaacaaggagccaggaccctaccaacac
agcaaatactcacacatcaagctctccttcaaagaacatgggcagattgagttttacagg
aggctaacagaggagatgacccagaagagatgggagaatacaccagtttcacaaccgatc
cccacaggaactggccctcaggcaggaaggacacgtgcagtggggattgtcggcattgaa
aggaagatagaggagaagaggaaagaaacagacaaaaacatttcagaggcctttgaggac
ctcagtaagctgatggtgaaggctaaagaaatggtggaggtgtccagatctatagctaac
aagatcaaagacaagcaaggggacataacagaggatgagacaatccgctttaagtcctac
cttctgagcatgggtatcgctgaccctgtcaccagagaaacacacgggtcaggtacacat
taccatttgcagctggctaaacaactgggagatatgctacaggcccctctcgaggagcgt
gggggtatgatggctctcactgaggtctactgtctcgtcaaccgagctagagggatggag
cttttatctccagaagatttggtaaacgcatgcaggatgtttgagtcattgaaactccca
ttgaggctgcgagtgtttgacagcggtgtgatggtggtccagctgcagtctcacagtgaa
gaggaaatgatagcctccgcactggacaatgtgtcagataaaggctctttaacagcagag
gagtttgcaaagctcttgggtctctctgttcttctgtctaaagagcggttgttgctggct
gagaagatgggtcacctgtgtagagatgactctgttgagggtttgagattctacccaaac
ctcttttga
DBGET
integrated database retrieval system
