Scomber japonicus (chub mackerel): 128371247
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Entry
128371247 CDS
T09718
Name
(RefSeq) ras-related protein Rab-6A isoform X1
KO
K07893
Ras-related protein Rab-6A/C/D [EC:
3.6.5.2
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128371247
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128371247
04031 GTP-binding proteins [BR:
sjo04031
]
128371247
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.2 small monomeric GTPase
128371247
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
128371247
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
128371247
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128371247
Exosomal proteins of bladder cancer cells
128371247
GTP-binding proteins [BR:
sjo04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
128371247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
SRPRB
MMR_HSR1
RsgA_GTPase
FeoB_N
Gtr1_RagA
CPT
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
128371247
NCBI-ProteinID:
XP_053187489
LinkDB
All DBs
Position
13:20925912..20935526
Genome browser
AA seq
208 aa
AA seq
DB search
MSAAGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTT
QDKSREDMIDIKLEKPPEQPVTEGGCAC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggccggagactttggaaatcccttaagaaaatttaaattggtctttctcggg
gagcagagcgtgggaaagacgtcgctgatcaccagattcatgtatgacagcttcgacaac
acttaccaagccacaataggaatagatttcctgtcgaaaaccatgtaccttgaagacaga
acaatcaggttgcagctgtgggacacggcagggcaggagcgatttcgtagcttgatccca
agttacatcagagactctgctgcagctgttgtagtgtatgacatcacaaatgttaactcc
ttccagcaaaccacaaaatggattgatgatgtgagaacggagagaggaagtgatgtcatt
atcatgctggtgggaaacaagacagaccttgcagacaaaaggcaagtatctattgaagag
ggtgagcggaaagccaaagaactaaatgtaatgtttattgagactagtgcgaaagcaggc
tacaacgtaaagcagcttttccgtcgtgtggcggccgccctgcctggcatggataccaca
caggacaagagtagagaggacatgattgacattaaactggagaagccaccagagcaaccc
gtcactgaaggaggctgtgcctgttaa
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