KEGG   Scomber japonicus (chub mackerel): 128371249
Entry
128371249         CDS       T09718                                 
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128371249 (brwd3)
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     128371249 (brwd3)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF12 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_WDR11_1st Auxin_resp Beta-prop_VPS8
Other DBs
NCBI-GeneID: 128371249
NCBI-ProteinID: XP_053187492
LinkDB
Position
13:complement(21101988..21120109)
AA seq 1811 aa
MAREGYSQIEAELYYLIARFLQSGPCQKAAQILIEELEEYELVPQRWSWDGHKNKRTFHD
WVILNQHIPADYLLHICQRIGPLIEKEIPPSVPGVQTLLGLGKQSLLRTTKSCSHKVCSG
SAVAALHRGRPPEPPVSNGNSPSVVSIMGARQATGTARFGQVLPSSSYQHMKIHKRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLTTLRGHSAEICDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPIIVLQAHAASITSIMFCPAVKGTTRYLASTGADGMVCFWKWHS
LSMKFNEQPVKFVERSRPGVQVSTSSFSSGGMFMATGGTDHMIRVYYLGAETPMKVSEMD
AHTDKVVVVQFSNNSDSLRFVSGSRDGTARIWHYQQQEWKSVSLDMAARLPGSSVANGDD
KTKLVVTMVAWDRADHTIITAVSNYLLKVWNTTTGQLLHVLSGHDDEVFVMEAHPFDSRI
MLSAGHDGNIYIWDLTKGAKIRNFFNMIEGQGHGAIYDCKFSADGQHFACTDSHGHLLIF
GFGCSKPYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPSPFLVDVDGNPHPPH
YQRLVPGRENCKEDQLVPQLGYMANSEGELVEQVLGQQTGENRESLLDSLIRQLQDEQDE
RQNPEEQAEEEEEAGDAEDLVPSSPTAETRRSGQVDGVWQMQHNALRSQVATERDLLAWS
RRVVVNEVPHGTFRVMEECRRAKADMECSLYNAERRKKPVNCTPKTDLLTTRLRSLRPTK
KKQQQHAYQTRSAQVRRPRNRSRNSNNRRNSDSQVDSDSDRDATEQAEPSDASSDGEARW
QSESSSSDSSSEYSDWTADAGINLQPPKRTTRRPVKRPEYSSSEEEEGEDKANEAQTREN
EKRKKPKETKQKPTSSLAGLDAEEWLPPAWIMETIPHRSPFVPQMGDELIYFKQGHQAYV
RAVRRAKAYSINPQKQPWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPVSGKMTN
ESFSLKYHDMPDVIDFLVLQQFYNEAREHNWQPGMRFRSIIDDAWWFGSVEDQEPLQPEY
PDSLFQCYAVKWDNGEREKMSPWDMEPIPEEAALPEQVGDGVEVAEEELKALLYTPQEGE
WGAHTRDEDCERVIAGIDQLLTLDVAKAFALPVNLRDYPLYCTAVAYPTDLSTIRKRLEN
RFHRRISALMWEVRYIEHNARTFNEPQTPIVASAKVVTDVLLRYIGDQSCTDILDLYHKL
KCEISSGGEDEGDLDVDSDTPGTSTGHGGAKRGVALDVKVWRNQCRELLRRMMVSPDSEP
FRQPVDLFEYPDYRDIIDTPMDLGTVSEALAVGNYQDPMEYAKDIRLIFSNSKAYTPNKK
SQIYTMTLSLSAFFEKNIISIISDFKSALQNERRVRQRISYRSRLHNGGSSPPNSPSPSP
KGKHKSGKVSKPKRSRTTKKNRSQRSYQAQQSSSVAEEEDMQSSSPSSGTSRNQRVTRSQ
ATPVKKSAGQRGNSHLSNGSRQRPRREAPKSGDDDDDKGQSGSSSSSSSSSSSGSSSSSS
SSSSSDSENGSDSEMEKYVEGGDHDYSKAPCLSLRLSAKGKVAASGKRKHKGGGGAEEVA
QRPKRARVQLPVQEEEEEEEEEEDEDEEEEEEDEEEQEEEEEEEEEEEEEQQQKQQQELH
EKPEEGEEENEQEEEDEEGEEENEQEEEDEEEEEEPEEEEEPEEEEEDDDNSEVQRGAAA
AAANSLRSSQCRSRRVSTRNQGRRTVLYRDESEDDGHGSKEDPLNLGMSRSGRVRRMTEK
ARVSHLMGWSH
NT seq 5436 nt   +upstreamnt  +downstreamnt
atggccagagaaggatattcacaaatcgaagctgagctgtattacctcattgccaggttt
ctgcagtctggaccttgtcaaaaagcagcacagatactgattgaggagctggaggagtat
gagttggtcccgcagcgatggagctgggacggacacaaaaacaaacggaccttccacgac
tgggtgattttgaaccagcacattcctgcagactacttgctgcacatctgtcagcggata
ggtccacttatagagaaggagatcccacctagtgtcccgggagtccaaacacttctgggg
ctgggaaaacagtccttgcttcgtaccaccaaaagttgtagccacaaagtatgcagtggc
tccgctgttgctgcactccaccgaggacgtccaccagaacctccggtcagcaatggaaac
tctcccagtgttgtgtccatcatgggtgctcgccaggccacaggcacagctcgttttggc
caggtccttccgtcttcctcctaccaacacatgaagatacacaaacgtatcctcggtcat
ctttcttcagtctactgtgtagcctttgaccgcaccggccgtcgaatatttacgggttct
gatgactgcctggtaaaaatctgggccacagatgatggccgtctccttacaacactgcgt
ggccactcagcagagatctgtgacatggccgtcaactacgagaataccctcatcgcctcg
gccagctgcgacaaagtcatcagagtttggtgtttacgtacctgcgcccccattatcgtt
ctgcaggcccacgctgcctccatcacatctataatgttttgtccggcagtaaaagggaca
acacggtacctggcctccacaggtgcagacggcatggtgtgtttctggaagtggcactca
ctcagcatgaagttcaatgaacagccagtcaaatttgttgagcggtcacgtccaggtgtg
caggtctctacttcctccttcagcagtggtggtatgttcatggctactggtggcactgat
catatgatcagggtttactaccttggtgctgaaactcctatgaaggtctctgagatggat
gctcatacggataaagttgtagtagtccagtttagcaataacagcgacagcctaaggttc
gtgagcggcagtcgtgatggcacagccaggatctggcattaccagcaacaagagtggaag
agtgtctctttagacatggctgccaggctgcctgggagttctgttgccaatggagatgat
aaaaccaagctggttgtgaccatggtggcctgggaccgagcggatcacaccatcattaca
gcggtttcaaactacctgctcaaagtgtggaacacaactactggacagctgctgcatgtt
ttatctggccatgacgatgaggtgtttgtgatggaggctcacccattcgactcccgcatc
atgctatctgccggtcacgatggcaacatttacatctgggacctgaccaagggagctaag
atccgcaacttcttcaacatgatcgaaggacaaggccacggtgctatttatgactgcaag
ttctcagctgatgggcagcattttgcctgcactgattcccacggacatttgctcatcttt
ggcttcggttgcagcaaaccatatgagaagattcctgatcagatgtttttccacacggac
taccgacctcttattcgtgatgctaataactacgtcctggatgagcagacgcagcaggcc
ccacacctcatgccttcacctttcctggtggacgtcgatgggaatcctcaccctcctcac
taccagcgcctggtgccaggaagagagaactgcaaggaggaccagctagtacctcaacta
ggatacatggcaaacagtgaaggagagttggttgagcaggtacttggccagcaaacaggg
gagaacagagaaagcctgttggacagtctcatcagacagttgcaggacgagcaggatgag
cgtcagaacccagaagagcaggctgaggaggaagaagaagctggtgatgcagaagacttg
gtgccatcctctccaactgctgaaacccgcaggagtgggcaggtggacggggtgtggcag
atgcagcataatgccctgcgcagtcaggtggccactgagagggacctgctggcctggagc
cgcagagtggtggtcaatgaagtgccacatgggacattcagagttatggaggagtgcaga
cgagccaaagccgacatggaatgttctctgtacaatgccgaaaggaggaagaaaccagtg
aactgcacacccaagaccgatctgctgaccacgcgcctgcgctccctgcggccgacaaag
aagaagcagcagcagcacgcctatcagacccgctcagctcaagtccgccgtcccaggaac
aggagtcgaaattccaacaaccgacgcaattctgacagccaagtagactcagacagcgat
agagatgcaacggaacaggcggagcccagcgatgcttcctctgatggtgaagctcggtgg
cagagtgagagcagctccagtgactcctccagtgaatattcggattggaccgccgatgct
gggatcaaccttcagccaccgaagcgaacgaccaggaggcctgttaagcgcccagaatac
agcagctctgaagaggaggaaggagaagacaaggcaaacgaggcccagacgagggaaaat
gagaagaggaagaagcccaaggagaccaaacaaaaacccacatcctctctggctggactt
gatgcggaggaatggttgccaccagcttggataatggaaaccatcccacaccgctcccct
tttgttccacagatgggagatgagcttatctacttcaaacagggccatcaggcatatgtc
cgggctgtccgcagggccaaagcatacagcatcaaccctcagaaacagccttggaacaaa
ctcaacctcagggatcaggaatctgtgaaggttgttggaataaagtatgaagtgggacct
ccaaccctctgctgcctcaaactggctttcttggacccagtctcagggaagatgaccaat
gagtctttctccttaaagtaccatgacatgcctgatgtcatagattttctggtcctgcag
cagttttataacgaggctagagagcacaactggcagccaggtatgaggttccgcagcatc
attgacgacgcttggtggtttggctctgtggaggaccaggagcctctgcagccagagtat
ccagatagcctgtttcagtgttatgcagtgaagtgggataatggtgagcgggagaaaatg
agtccctgggacatggaacctattcctgaggaagctgcattgccggaacaggtcggtgat
ggtgtagaggtggcggaggaggagttaaaggctctgctgtatacgcctcaggaaggagaa
tggggggctcacacacgggacgaagactgtgagagagtcattgcaggcatcgatcagctt
cttacactggatgtagccaaggcatttgctttacctgtaaatctgcgggactaccctctg
tactgcactgccgtggcttaccccactgacctcagcaccatccgcaaacgactggagaac
cgcttccacaggcggatctctgcgttaatgtgggaggtgcgctacattgaacacaacgcc
cgcactttcaacgagccccagacccccattgtagcatcagccaaagtggtgactgacgtt
ctcctccgctatattggggatcagagctgcacagacatcctggatctgtatcacaaactg
aagtgtgagatcagtagtggaggagaagatgagggcgatttggatgtggactctgacact
ccggggacatctacaggacatgggggagcgaagcgcggtgttgctttagacgtgaaagtg
tggcgaaatcaatgccgagagctgctgcgtcgcatgatggtctcccctgattctgaacca
ttcagacagcctgtggatctttttgagtatccggactatcgagacatcatcgacactccc
atggatctgggtacagtgtcagaggcgctggctgtgggaaattaccaggatccgatggag
tacgccaaagacatccgcctcattttcagcaactctaaagcgtacacacccaacaagaaa
tcacagatctacaccatgaccctaagcttgtcggcgttctttgaaaaaaacatcatctcc
atcatctccgacttcaagtccgcccttcagaatgaacggcgggttcgtcagaggatcagt
tacaggagtagattgcacaacggaggcagctccccgcctaatagtccatccccgagccct
aaagggaagcacaagtcagggaaggtgtcaaagccgaaaagatcccggaccacaaagaag
aatcgttctcagagatcatatcaagctcaacaaagcagcagtgtagcagaggaagaggac
atgcagtcttcttccccaagttcagggacgagcagaaaccaacgggtgacccgcagccaa
gcaactccagtgaagaagtcagcagggcaacggggaaactcccatctgagtaacggctcc
aggcagcggccaaggcgagaggcgccgaagtccggcgacgatgacgacgacaaggggcag
tcaggatcctccagctcctcctcgtcctcgtcgtcgtccggctcctcgtcctcgtcctcg
tcctcctcctcgtctgacagcgagaacggctcagattccgagatggagaagtacgtggag
gggggagatcacgactacagcaaagccccctgcctgtcgctgcgcctctcagctaaggga
aaggtggcggcctcagggaaaaggaaacacaaaggaggaggaggagcagaggaagttgca
cagagacctaaaagagcacgagtgcagctgccggtacaggaggaggaggaggaggaggag
gaagaggaagatgaagacgaagaggaggaggaagaggatgaagaagaacaagaggaggag
gaagaggaagaggaggaggaggaagaagagcagcagcagaaacaacaacaagagctgcat
gaaaaacccgaagagggagaggaagagaacgagcaggaggaagaggacgaagagggagag
gaagagaacgagcaggaggaagaggacgaagaggaggaggaggagcctgaggaggaagag
gaacctgaggaagaggaggaggacgatgacaactctgaggtgcagagaggggcagcagca
gcagcagctaacagtctgagaagtagtcagtgcaggtctcggcgggtcagcacacgtaac
cagggtcgcaggacagttttgtacagggacgagtcagaggatgatggccatgggtcaaag
gaagaccccctcaacctgggcatgtcccgctcaggacgggtacgccgtatgactgagaaa
gcccgtgtcagccacctgatgggctggagtcactga

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