KEGG   Scomber japonicus (chub mackerel): 128371377
Entry
128371377         CDS       T09718                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128371377 (zc3h12b)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     128371377 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 128371377
NCBI-ProteinID: XP_053187659
LinkDB
Position
13:complement(21312122..21322637)
AA seq 846 aa
MTAWSMLEKLKMEKRPCREENIDSSEAQHATDESEDGSSSESESEEQQHLKVQANSSSSC
KRREPLAATKPHRQLCRSPCLDRPSFSQSSTVQDFREDDAGAGAGIKHASDREYQTKMEF
ALKLGYSGEQVQTVLNKLGAAALINDVLAELVRLGNKVEPESQPSSSTATSVSRSPCVKE
TASPEVSLEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDIT
VFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVK
CGTGPATVKGDNSEAKRVAPKRQSDPSIRSVACEPPEALSIVRKSETNSVPSLVSALSVP
TMQPAKSHAAGALNTRSASSPVPGSLQFSHSSLEHMSSVQYPPILVTNSHGASVTYSEQF
PKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSD
SFSSYGDLYPSSVDSSLEESMKGQQQSSAQARMHAFSHGFRHEALTRVQSYGPEEPKQGP
RKQSGAHLAPHIQHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYD
SNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWETPSAAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVT
KLRSCH
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatgttggagaagctcaaaatggaaaaacgcccatgcagggaagag
aacattgactcaagtgaggcccagcatgccactgatgagtctgaggatggaagcagctca
gaaagcgaatccgaggagcaacaacacctgaaggttcaggctaacagcagcagcagctgt
aagaggagggagcccttggctgctacaaaaccccaccgccagctctgtcgttctccgtgc
ctggaccggccaagtttttcccagagtagcaccgtgcaagattttcgtgaggatgacgcc
ggtgcaggagcggggatcaaacatgccagcgacagggagtaccagacaaagatggagttt
gctttgaagctgggctattcaggagagcaagtgcagacagtgctcaacaagttgggagct
gccgctcttattaacgatgtgctcgctgagttagtaaggcttggaaacaaagtagagcct
gaaagtcaaccttccagcagtacggccacatctgtgtcacgctccccctgtgttaaagag
accgcgagtccagaggtgtcattggaagaggagtctgtggatacatatgataatctcagg
cctatcgtcatcgatggttcaaatgtggcaatgagccatggaaacaaagaggtgttctca
tgccgtggtatccagcttgctgttgaatggttcctagagaaaggacataaagacatcact
gtgtttgtcccagcctggaggaaggagcaatcaaggcctgatgccctcattacagatcaa
gaaatattacgcaagctggaaaaagagaagatcctggttttcaccccatctcggagggtt
caaggccgaagagtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattct
gatggaattattgtgtcaaatgacaactatagggacttacaaaacgagaagccagagtgg
aagaagttcatagaggagcgtctcctaatgtactcatttgtcaatgacaagtttatgcca
cctgatgatccactgggaagacatggtccaagcttagaaaatttccttcgcaagcgtcct
gttgttccagagcacaaaaaacaaccttgcccctatgggaaaaagtgcacatatggacac
aagtgcaagtactaccatccagagcgcgtcaaccagccgcagcggtcagtggctgatgaa
ctgcgggcttttgccaaattgtctgcagtgaagacaatgagtgagggggctttagtcaaa
tgcggtactggtccagcgactgtaaaaggggacaactctgaggccaaacgtgtggcaccc
aaacgtcagtctgaccccagtattcgttcagtggcctgtgaacctccagaagcgctgtca
attgttaggaagtctgagacaaattcagtgccttcccttgtgtctgctctcagtgtgccc
accatgcagcccgccaagagccacgcagctggggccttgaatacccgatcagccagcagc
ccagtgccaggttctttgcagttctcacacagttctctggagcacatgtctagtgtacag
tacccgcccattttggttactaatagtcatggcgcctctgttacatacagtgaacagttc
ccaaagtatgactcagttagtgaccatggatattactcactgcacagtgatttttcaaac
atgagcatgagcagcatgcataacgtcgacagtttctgtagcatggagcatgagcatggt
gtgtatcagagaaatcccagccactgccctgaatcctgcctcagccattcaaacagcgac
tcgttctcctcctacggggacctgtacccaagctctgtggacagtagcttagaggagagc
atgaaggggcagcagcagtcttctgctcaggctagaatgcacgctttctcccatgggttt
cggcatgaagcgctgactagggtacagagttatggaccagaggagcccaagcagggccct
cgtaagcagtctggagctcatctcgcaccacatatccagcatgctgcagtgggggccagg
tccagctgccctggagactatcccctcactcagaatgtcctcccacctctgtcctcccag
cccactcggtctcttggcatgactcgtatggacagcatatcagattcacggctgtatgat
agcaacccaatgagacagaggcgacctccactgtgccgcgagcagcacgcaagctgggac
cctctgccttgtggtaatgagtcctacgggtatcactcatatccactgagtaacagcttg
atgccatgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatttgg
aactcgccgtgggagaccccatctgcagctgaacaccaagagcggtatgtcatcccagat
caccagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactca
gtgatggagaagaaccctcatttgacagatccccaacaactcgccgccgtcattgttaca
aaactgagatcatgccattga

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