Scomber japonicus (chub mackerel): 128371480
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Entry
128371480 CDS
T09718
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128371480 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128371480 (supt20)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
128371480 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
128371480
NCBI-ProteinID:
XP_053187783
LinkDB
All DBs
Position
13:18855856..18867026
Genome browser
AA seq
829 aa
AA seq
DB search
MQQVLEYALDRAEYIVESARQRPAKRRISSGGRKSLYQKLYELYIEECEKEPELKNLRRN
VNLLEKLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIVEVRDYRQSGNTKMPTYQSRHILLRPTMQTLICDVHAL
TSDHHKWTQDDKLQLESQLILATAEPLCLDPSISVTCTANRLLYNKQKMNTRSMKRCFKR
HSRAALNRQQELSHLPMPPQLRLYDYLQRRKERKPVPVIDLKISKVGNCVDMWKQSNCQL
SVPKEIDVEKYAVVERSLQLEDSQPTTVIWPAEEVVDDYTFECEVGGQAQRTKVSIFQSM
GDPLVYGKIYCAKESKEEEESSDLKLIHPPFLIGSKKDADRFLDQYKGVYERDVKCQVKM
SHNSGSMGPPSPSKDEGDGISPLVQTSVLGKGVKHRPPPIKLPSGSGSSSSGNPYSSQTS
GLLKCPTPPPAKSQSLNRKHSMELGQVGLLSPSSLSPMGSTQRSGTPKPSTPTPTNTPCS
TPHPADSLSAPLSITPTPSDPPMVQSQSHPTLLTPFAQQQLALSQPLPVMTIPLPTMGTS
ITTGTTSSQVMANPAGLNFINVVSSVCSPQTLMSGSNPMLGPGLNLSGILPPGGLMPTMQ
SATQTGSPFGLNSSAGLRPLNVLQIPTGPLIFNSLQQPQLSQFSPQQSQSATSSPQQQGE
TGEQGTDQSLGNQQTAVINLGVGGFMSPQAAVLSQLGCGLDGSGPPLPSPRLQQQHQPQI
QLQFLQHQMQQQQMAMGAAAPQGGAPRQHTANQPRSKRKRSTPQPLPKS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttttggaatatgcattggatcgagccgagtacattgttgaaagtgctcga
caacgaccggccaaaagaaggatatcttcaggtgggaggaagagtttgtatcagaaactc
tatgagctgtacatagaggaatgtgagaaagagccagagttaaagaatttgagaagaaat
gtgaatctactggagaagctagtgtctcaggagtctgtgtcatgtttggtggtcaacctg
taccctgggaatgaaggctattctttaatgctcaggggaaaaaatgggtccgattctgaa
accatccgtttgccatatgaagaaggagaactgctggagtacctggatgctgaggagttg
cctcctattctggtagatctgttggagaaatcacaggtgaacatcttccactgcggatgt
gtaatagtggaggtgagagactacaggcagtctggtaatactaaaatgcccacctatcag
agcagacacatcctgctgcggccaaccatgcagactttgatctgtgatgtccatgccttg
accagtgaccaccacaagtggacacaggatgacaaattacaactggagagtcagttgatt
ttggcaacggccgaacccctgtgcctggatccctccatttctgtcacctgcacagccaac
cgcctgctttacaacaagcagaaaatgaacactcgctccatgaaacggtgtttcaagaga
cactctcgagctgcactgaacaggcagcaagagctgtcccacttgcccatgccaccgcag
ctacgactctacgactacctacagaggagaaaggagaggaaacctgttcctgtcatagac
cttaagatctccaaggttggaaactgtgtcgacatgtggaagcagagcaactgccaacta
agtgtaccgaaggaaattgatgtggaaaagtatgctgtggttgagagatccttgcagctg
gaggactcccagcccactactgtgatctggcctgctgaggaagttgtagatgactacacg
tttgaatgtgaggtcgggggtcaagcccagaggaccaaggtgtctatcttccaatcgatg
ggagacccactggtgtatgggaagatctactgtgctaaagaatcaaaggaagaggaggag
agcagtgatctaaagctcatacatcccccgtttcttataggctcaaagaaagatgcggac
cggtttcttgatcagtacaaaggagtgtatgaaagagatgtgaagtgtcaggtcaagatg
tctcataactcaggcagcatggggcctccctctcccagcaaagatgagggtgatggtatt
tctccactggtccagacgtctgtgttgggaaaaggggtgaaacaccgcccccctcccatt
aaactgccttcaggatcaggcagcagctcctcaggtaatccatatagttcccaaaccagt
ggtctactcaagtgtcctacgccccctccagccaaaagccagtctctgaacagaaagcac
tccatggagctgggccaggttggcttgctgtcaccttcctccctttctcctatgggctcc
acacagagatcggggacccccaagccatccacccccacacccaccaacacgccatgctcg
accccacaccctgctgattctctcagcgctcctctctcgattaccccgaccccatcagac
cctcccatggtacaaagccagtcgcatcccaccctcctcacgcctttcgcccagcagcaa
ctggctctaagccaacccctacctgtaatgactattcccctgcccaccatgggtacatct
atcaccacgggaaccacctcgtcgcaggtcatggccaaccccgcagggcttaatttcatc
aatgttgtcagctccgtctgcagtcctcagactttgatgagtggctctaaccccatgctg
ggtccaggccttaacttgagtggaatcctgccacctggaggcctgatgcccaccatgcag
tctgcaacacagactgggagtccttttggcctgaacagcagtgctgggttgagaccactg
aacgtactgcagatccccactgggcctctcatctttaactctctgcagcagccgcagctg
tctcagttctccccacagcagagtcagtcagccacctccagccctcaacagcagggagag
acgggtgaacaggggacggaccaaagtttaggaaaccagcaaacagcggtcatcaaccta
ggagtcggaggcttcatgtctccacaggcagcagtgctgtcccagttgggctgtgggctg
gacgggtctgggcccccgctgccttctccaaggcttcagcagcagcaccagccacagatc
caattgcaattcttgcagcaccaaatgcagcagcagcaaatggctatgggagcagcagct
cctcaggggggagcgccacggcaacataccgccaaccaaccaagaagtaagaggaagcga
agcacgccgcagcctctcccaaagtcatga
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