Scomber japonicus (chub mackerel): 128371509
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Entry
128371509 CDS
T09718
Symbol
crx
Name
(RefSeq) cone-rod homeobox protein isoform X1
KO
K18490
homeobox protein OTX2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128371509 (crx)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128371509 (crx)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
DUF5930
Motif
Other DBs
NCBI-GeneID:
128371509
NCBI-ProteinID:
XP_053187817
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Position
13:27097450..27099641
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AA seq
311 aa
AA seq
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MMSYIKQPHYTMNGLNLPGPGMDVLHTTVAYPCKYNLRYFPLTVSVWFAATPRKQRRERT
TFTRTQLDILEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQ
SKPRPPKKKASPAQEPSAPDPISNPSGSYSPSSAQSGPSLAPSSSTGNTAVSIWSPAISP
LPDPLASSAPCMQRPSPYPMSYGQPSAYTQGYASTTSYFTGLDCSAYLSPMHSQLSGTGG
ALSPITVPSMGGSLSQSPASLSSQGYSTASSLGFTSVDCLDYKDQQAWKLGFTTMDCLDH
KDQNSWKFQVL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacataaagcaaccccattacaccatgaacgggttaaatttgcctggaccc
ggaatggatgtgctacacacaaccgtcgcttatccctgtaagtataatctgagatatttt
cccctcactgtgtctgtgtggtttgcagccactccccggaagcagcgtagagagcgcacc
accttcacccggacacagctggacatcctggaggcgctgttctccaagacccgctatcca
gacatcttcatgagggaggaggtggccctcaagatcaacctacctgagtcacgtgtgcag
gtttggtttaaaaaccgccgtgccaagtgccgtcagcagcagcagcagagcagtggccag
tcaaagccccgccctcccaagaagaaggcctctccagcacaggaaccaagcgcccctgat
cccatttcaaacccatctggctcttacagcccctcctctgcccagtcaggtcccagtctg
gccccgagctccagcactggaaacactgccgtgtccatctggagcccggccatctcacct
cttccagaccctctggcctcctcggccccctgcatgcagcggccctcaccttaccccatg
agctacggccagccgtcggcctacacccagggctacgccagtaccacctcctacttcacc
ggcctggactgcagcgcctacctatcccccatgcactcccagctgtcgggcaccgggggc
gctctcagccccatcaccgtaccctcaatggggggttccctaagccagtccccagcatcg
ctgtcttcacagggctacagcactgcctcctccctgggcttcacctcggttgactgcctg
gactacaaggaccagcaggcctggaaactgggcttcaccacaatggactgcctcgaccac
aaggaccaaaactcctggaagttccaggtcctctaa
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