Scomber japonicus (chub mackerel): 128371511
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Entry
128371511 CDS
T09718
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128371511
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128371511
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128371511
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128371511
NCBI-ProteinID:
XP_053187824
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All DBs
Position
2:31032106..31040488
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AA seq
638 aa
AA seq
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MRGSSSYGDRDRDRGRDRPRFGAMSGRSGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
AEHPEIQHKNQYEMEEFCRKKEITIRGSGCPKSITAFHHAQFPQYVMDVLMHQNFKEPTA
IQAQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQ
INIGALELSANHNILQIVDVCMENEKDHKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
KMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQFVDSGR
GGGGGGRMRYRGSNSSNPNLMYQDECDRRMRSGGGGSKDNRHNNRDGDRSSSSYRDRSRD
HRSSYNSGSDHYQSYSSGGGFNSRSGAQSGGGGGQNQPSQPQPQFGQPPPPPPSGGPLHL
MAQQFAPPQPPLMGFIGQPPYSFASPPPPPSGPPPPRK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagagggagttcctcatatggggacagagacagagaccgaggacgggacaggcctcgg
tttggggccatgagtggtcgcagtggccccccgcccatgaagtttgggaatccaggggaa
cgtctccgcaagaagagatggaacctggacgagctgccaaaatttgagaagaacttctat
gctgaacatccagaaatccaacacaaaaatcagtatgaaatggaagagttttgcaggaag
aaggagatcaccatcagaggctctggctgtccaaagtcgatcactgcttttcaccatgcg
cagtttccacaatatgtgatggatgtgctgatgcatcagaacttcaaggaacccacagcc
atccaggctcagggtttccctgtggccctgagtggcagggacatggtggggattgcacag
actggctctggaaagacactggcttatcttcttcctgctattgtgcacatcaatcatcag
ccgtatctagagagaggagatggtccaatttgtctggtgctggctccaaccagagagctg
gcccagcaggttcagcaggtggcatatgactatggcaagtcttcccgaatcaaaagcacc
tgtgtctatggtggagcacccaaagggccgcagattcgagaccttgagaggggtgttgag
atctgcattgctacacctggtcgcctcattgacttcttggaggcagggaagactaacctg
cgtcgctgcacctacctagtgctggatgaagctgatcgcatgctggacatgggctttgag
ccgcagattcgcaagatagttgaacagatcaggcctgacagacagaccctgatgtggagt
gcaacctggccaaaggaggttcggcagcttgcggaagacttcctgagggactatgtccag
ataaatattggtgccctggagctcagtgccaaccacaacatcctgcagattgttgatgtg
tgcatggagaacgaaaaggaccacaaacttctgcagctgatggaggagattatggcggaa
aaggagaacaaaaccatcatctttgtggagaccaagaaacgttgtgatgatctgacgaga
aagatgaggagggatgggtggccagccatgtgtatccatggagacaagagccagccagag
agagactgggtactcacagaattccgaagtggcaaagctcccatcctgattgccactgac
gttgcctctcgtggtcttgatgtggaagacgtcaagttcgtcatcaactatgactatccc
agctcctctgaggattacgtccatcgtattggacgtacagcccgcagtaccaacaagggc
actgcatacaccttctttaccccagggaacttgcggcaggcccgtgaccttgtccgagtg
ttggaggaggcccggcaggccatcaatcctaaactgcttcagtttgtggattcgggccgt
ggtggaggaggcggtggcagaatgcgttaccggggcagcaactccagcaaccctaaccta
atgtaccaggacgagtgtgatcgccgcatgcgctctggtggaggtggcagcaaagacaac
cgccacaacaaccgtgatggagaccgctcctcttcctcctacagggacagaagccgtgat
cacaggagcagctacaactctggctcagatcactaccagagctacagcagcggcgggggc
ttcaactcccgcagcggagcacagtccggtggtggtggaggtcagaaccagcctagccag
ccgcagccccagtttggccagcctcctccacctccaccatcaggggggccactacatctg
atggctcagcagtttgctccaccgcaaccccctttaatgggcttcatagggcaaccgcca
tactcctttgcctctcctccccctcctccttctggcccaccacctccccggaagtag
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