Scomber japonicus (chub mackerel): 128371536
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Entry
128371536 CDS
T09718
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128371536 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128371536 (usp43a)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128371536 (usp43a)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128371536 (usp43a)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128371536 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128371536
NCBI-ProteinID:
XP_053187861
LinkDB
All DBs
Position
2:complement(24771081..24867236)
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AA seq
1228 aa
AA seq
DB search
MDARKENKVRKQPMKPKTTKRKEKKYKTGRFIRRKSLRSFGNFMGRILKTLGTLAHFGDA
QPPDAEDDDGGFGQSATGDCSHIPREGTVKKSSTVSSHGSVKDRLSWCYGDKTPGVLGLK
NHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDICHRRVNGEVRGEEPRIAGGEVTEQLA
SLVRALWTLDYTPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVNEDVNPSPNNN
SSSSNSKTKANVKASNSLEGPSSPSSASTQQSRGRHSFVQDHFQAQYRSSLTCPHCLKQS
NTFDPFLCISLPIPLRQTRSMCVTLVFSTKGQRYLRVGLAVPLFGSLSCLRAMVAEEGKI
SPDQVILSELYSTGFQRSFADDDDLTTIADSDVIYAFQAPLLHGRGGSAPHSGYHHSLPS
SPYTSPAGPDGQRLPSSGTLSSEYLNQGGSTKVLLLICNTAGSGPQATRFGPPFLMREDR
SVSWDQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSASYSYLSPQDSRPLYHPAVD
RALKFCGPGGPPHVKVVIEWEHKIKECLFGSIQEEVVKDAESVRNQQQQHLQQHSCTLDE
CFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLST
LVHFPLTGLDMAPHVVKRSQSMRNLNMGAWPPSWKQTSGQHHQPADMNLPHDYLYDLYAV
CNHHGGMHGGHYTAYCRNSVDSQWYSYDDSSVDLVPEEEVCTRGAYILFYQRRNVIPPWS
ASSSLRGSTSSSMSDHWLIRLTSNSKRGSLVSRSSTTCPSSIPDSPESPVFLENGSKEER
GGFESRPFIRGLQGRSVSMRAPTKTKDTLSKVLPLRWSFGSKDRRKPHPAPPGTRDPAPV
ELVQYLESGRRPRCTKDPIVMLMSEPRSAKESAESKTANNIRSSSVGSLSFVGKAGDEPE
SPKVPEGQKRPSDKTTSLRRSKGSQPRDEATTNISSSSSSNTLTRRKDAKKQSSSKALQD
TEPKMGSSAGVQPSYSTPSLHDGTLRRQMGDRADRERQGAYEGNSKPKKGEVHKSHEGLL
SFLKGNFLKKDKDPKKTKESESGKGGGEEGGRRTLSRLSLSNGAAGGGTGVEGGKSYGSG
QLGSELSNGKLGRTTPSDIKRSQSSSNIPTKSEQSMRRTASLHRNGMSTAPAPTRSLTTD
KPSYSTLQRTRYSTTSLGRKRTVPESSF
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccgaaaggaaaacaaggtaagaaaacaacccatgaaacccaaaacgacgaag
cgaaaagaaaagaaatacaaaaccgggaggtttatcagaaggaaatcgctgcgatctttt
gggaatttcatgggaaggatccttaaaactttgggcactttggcgcactttggcgacgcg
caaccgccggacgcagaggacgacgacggcggtttcgggcaaagcgctacaggcgactgt
tcgcacatccccagagagggaaccgtgaagaagagctccacggtgtcctctcatggctcg
gtgaaagatagactgtcgtggtgttacggcgacaagacccccggggtgctgggactaaag
aaccacggcaacacctgtttcatgaacgccgtggttcagtgcctcagcaacacggacctg
ctggctgagtatctcgggctggagcagtacaagtcggatatttgccacaggagggtgaac
ggggaagtgaggggcgaggagccgaggatcgccgggggagaagtgactgagcagttggct
tcgctggttcgagcgctctggacgctggactacacaccacagctctccgtggagttcaag
agcatagtggccaagtacggctctcagtttcggggaaactctcagcatgatgctctggag
ttcctcctctggcttttggatagagttaatgaagatgtcaatccaagccccaacaacaac
agcagcagcagcaacagcaagaccaaagccaatgtcaaggcatcaaattcattggagggt
ccctccagtcccagttcagctagcacacagcagtccagaggtcggcacagttttgtccag
gatcacttccaggctcagtacaggtcttctctgacgtgccctcattgccttaagcagagc
aacaccttcgacccgtttctatgtatctccctgcctatccccctacgacaaaccaggtcg
atgtgtgtgaccctggtgttcagtacaaagggtcagaggtatcttcgggtggggctggct
gtacctctctttggttccttgtcctgcctgagagccatggtagcagaggagggcaaaatc
tctccagaccaggtcatcttatcagagttgtactccacgggtttccagcgttccttcgca
gatgacgatgacttgacaacaatcgctgatagcgacgtcatttacgccttccaggctccg
ctcctccacggtcgtggaggctctgcaccacactcagggtatcaccacagcctgccctcc
tctccttacacatctccggctgggcctgatggtcaaaggttaccatcatctggcacactc
tcctctgaatacctgaaccaaggtggctccacaaaggttcttctccttatctgcaacaca
gcaggatctggccctcaggccaccaggtttggacctccatttctcatgcgtgaggacagg
agcgtctcctgggaccagctgcagcagagcattctcagcaagctctattatctgatgctg
aatggatctcaggctcagaatgctggggtgctgtttaagatccgagtggtgggaggatcg
gcatcctacagttacttgtccccacaggacagcaggcctttgtaccaccctgcggttgac
agagccctgaagttttgcggccccgggggacctccacatgtgaaggttgtcattgagtgg
gagcacaagattaaagaatgtctgtttggcagcatccaggaggaggtggtgaaggatgcg
gaaagtgtaaggaaccagcagcagcagcacctacagcagcatagctgtaccttggatgag
tgcttccagctgtataccaaagaggaacagcttgccccagacgatgcttggaagtgcccc
cactgtaagcagcttcagcagggcatggtaaagatgagcctgtggacactccctgacata
ctgatccttcatctcaagcgcttccgacaggtgggcgagcggaggaacaagctgtcaacc
ctggtgcatttccctctgactggtttggatatggccccccatgtggtgaagaggagtcag
agtatgaggaacctgaacatgggggcctggccaccatcgtggaaacagacctcaggccaa
caccaccaacctgctgacatgaacctaccccacgactatctgtatgacctttacgctgtg
tgtaaccatcatggaggaatgcacggtggacactatactgcctactgcaggaactcagtg
gacagtcagtggtatagctacgatgacagcagtgtagacctggtgccagaggaggaagta
tgtaccagaggggcctacatccttttctaccagagacgcaatgtcattcctccatggtcg
gccagtagctccctcagaggctccacaagttcatcaatgtcagatcactggctaatccgg
ctgacaagcaacagtaagagaggcagtcttgtgtctagatcctccaccacctgcccgtct
tccatacctgattcaccagagtctccagtcttccttgagaatggttctaaagaggaaaga
gggggttttgagagcaggccatttatcaggggtcttcaaggacgcagtgtgagcatgaga
gcccccaccaagaccaaggacaccctgagcaaagtgcttcccctgcgctggtcctttggt
tcaaaagaccgacgaaaacctcacccagcacctccagggacccgagatcctgctcctgtg
gagctggtccagtatttggaatctggccggcgaccccggtgcacaaaggatccaatagtg
atgctgatgagtgaaccacgcagtgcaaaggaatctgctgagagcaagactgcaaacaat
attcgatcttccagtgttgggagcttaagttttgtgggtaaagcgggagatgagcctgaa
tctccaaaggtcccagagggccagaagaggccatcagacaaaacaaccagcttgagacga
agtaaggggagccagccaagggatgaggctaccaccaatatcagcagtagctctagcagc
aacaccctaaccaggagaaaagatgccaagaagcagagctcctccaaagctctccaggac
actgagccaaaaatgggctccagtgctggagttcagcccagctacagtactcccagcctt
catgatgggactctgagaagacaaatgggagacagggctgatagggagcgtcaaggtgca
tatgaaggaaactccaagcctaagaagggagaagtgcacaagagccatgagggactgctc
tctttcttgaaaggtaacttcctaaagaaggataaagacccaaagaaaaccaaagagagt
gagtcagggaaaggaggaggtgaggagggaggcagaaggactctctctaggctttcgctg
tccaacggagcagcaggaggcggtactggggtggagggtggcaagtcttatggctcaggc
cagctgggcagtgaactgtcaaacgggaagttgggacgaactaccccatctgacatcaaa
cgctcccagagctcctccaacatccccacaaagtcagagcagagcatgcgcaggacagca
tctttacatcgtaacgggatgtctacagcgcctgcaccaacacgcagcctaacaacagac
aaaccatcttacagtaccctgcagaggactcgttacagcacaacctcactgggacgtaaa
agaacagtccccgagtccagcttctga
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integrated database retrieval system
