Scomber japonicus (chub mackerel): 128371619
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Entry
128371619 CDS
T09718
Name
(RefSeq) glucocorticoid receptor-like
KO
K05771
glucocorticoid receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128371619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128371619
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128371619
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
128371619
Nuclear receptors [BR:
sjo03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
128371619
BRITE hierarchy
Motif
Pfam:
Hormone_recep
zf-C4
GCR
TFIIA
Motif
Other DBs
NCBI-GeneID:
128371619
NCBI-ProteinID:
XP_053187951
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All DBs
Position
13:12138933..12210221
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AA seq
813 aa
AA seq
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MDQGGLKRNGNRDDSLTFGETAAGICRDTGDTAGSLLQSAMHLSSPVSLPTVDLNGQGGT
KDRAQLGGLFEAPQHHVLSEGSDMKEGKLIRMQKPSQQHQDIGVSNIEGNLPLLNQNISD
LDRMSTSVINTSDTSILGNLPLPDLFPQHIKQEGNFPLDKDLGTYSGLAGAGPCDLDSSR
LMDDSEIWQDLDLPNTLPEISDFELDSEVAHLDNILHDSSSVGGPVSGLLIETKSLLGNK
GNCTNVNGTEKQHPIHHQQQQQQQQQQQQQQHLLLQHQQQQLHPQHQQPPSLLSSVMIKE
EKDPDNTFIHICTPGVLKQEKQDSTSFCQSQCLQNSMSSLHGGGPMSSPVAVGAGAGYHY
SANPSSTVGLPDQKPFGMYSNLTPVGESWVRGNRYGEASRIQRGDDGLPSATALSSFAVN
FSSSSPRTGEASNSVVPSQSKPSGQTHKICLVCSDEASGCHYGVVTCGSCKVFFKRAVEG
WRARQNTDGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKNKKLIKMKVQ
RPPGSSEPITNMPVPVIPRCMPQLVPTMLSVLKAIEPEIIYSGYDSTLPDTSSRLMTTLN
RLGGQQVISAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFSLGWRSYEQCNGTMLCFA
PDLVINKERMKLPFMNEQCEQMLKICNEFVRLEVSYEEYLCMKVLLLLSTVPNDGLKSQA
VFDEIRMTYIKELGKAIVKREENASQNWQRFYQLTKLLDSMQEMVDGLLQICFYTFMNKT
LSVEFPEMLAEIITNQIPKLKDGSVQPLLFHQK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggtggactgaagcgcaacggtaatcgagacgacagcctgacatttggggag
acagcagccggaatatgcagagatacaggtgacacagctggttcactgctccagtctgca
atgcacctgtccagccctgtgtctctgcccacagttgacctaaatggacagggtggaacc
aaagaccgggcgcagcttggaggcctctttgaggcccctcagcatcatgtcctgtctgaa
gggtcagacatgaaggagggtaaactcatcagaatgcagaaaccatcacaacaacatcag
gatattggtgtaagcaacattgaggggaacttgccattgttgaaccagaatatttctgat
ttagaccggatgtccacctctgtcatcaacacatctgacacctccatcctgggcaacctc
cctctgcccgacctttttccccagcacatcaagcaggaggggaattttcctctggataag
gacttaggaacttacagcggacttgcaggtgctggtccgtgtgatttggatagtagtcgt
ctaatggacgacagtgagatttggcaagacctggaccttcctaatacgctgccagaaatc
agtgattttgagttggattcagaagtggcccacttggataacatcctgcatgacagcagc
agtgttggcggtcctgtcagcggcttgctaatagagactaagtctctcctgggtaacaaa
ggaaactgtaccaatgtgaacggtacagagaagcagcaccccatacaccatcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcatctcctcctacagcaccagcaacag
cagcttcaccctcaacatcagcagcccccatcacttctctccagcgttatgatcaaggag
gagaaggatcccgacaacactttcattcacatttgcactcctggtgtgctcaaacaggaa
aagcaagacagtacttctttctgccagtcacagtgtctccagaacagcatgagctctctt
catggaggaggccccatgtcctcacctgtggccgttggcgcaggagctggctaccactac
agcgctaacccgtcctccacagtgggcctaccagaccagaagccttttggcatgtactca
aacctgactccggtgggcgagagctgggtcagggggaacaggtatggagaggcttctagg
atacaaaggggcgatgatgggctcccctctgccacagccctgtcaagttttgctgtcaac
ttctccagctcatcacctagaacaggagaggccagtaattctgtggtaccaagccaatcc
aagcccagtgggcagacccataaaatctgtttggtgtgctcagacgaggcttcgggatgc
cactacggggttgtaacctgcggcagctgcaaggtgttcttcaagagggccgtcgaagga
tggagagcacgacaaaacacagatgggcagcacaactacctgtgtgcagggagaaatgac
tgcatcattgataagatccgcaggaagaactgtccagcctgccgcttcaggaaatgtctt
caagccggaatgaacttggaagcaagaaaaaacaagaagctaatcaagatgaaagtgcaa
cggccccctggatcatcggagcccatcaccaacatgcctgtgccagtcatccccaggtgc
atgccccaacttgttcccaccatgctgtctgtactcaaggccattgagcctgagatcatc
tactcaggctatgacagcacactgcctgacacctcttcgcggctcatgaccactctcaac
aggctggggggacagcaagtcatctctgcagtcaaatgggccaagtctctaccaggcttc
cgtaacctgcacctcgatgaccagatgacattgctacagtgctcctggctcttcctcatg
tccttcagtctgggttggaggtcatatgagcagtgtaacggtaccatgctctgtttcgcc
cctgatctcgtcatcaacaaagagcgtatgaagctgcccttcatgaacgaacagtgcgag
cagatgctgaagatctgtaatgagtttgtcagactggaggtgtcctatgaggagtacctg
tgcatgaaggtcctgttactgctcagcacagtaccaaatgatggactgaagagccaggca
gtgttcgatgagatcaggatgacgtacatcaaggagctgggaaaagccatcgtcaagaga
gaagagaatgccagtcagaactggcaacgcttctaccagctgactaagctactggactcc
atgcaagagatggtcgacggtcttctccagatctgtttctacacctttatgaataaaacc
ctcagtgtggagttccctgagatgctggcggagatcatcaccaaccagataccaaaattg
aaagacgggagcgtccaacctctgctgtttcatcagaaatga
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