Scomber japonicus (chub mackerel): 128371677
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Entry
128371677 CDS
T09718
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128371677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128371677
04090 CD molecules [BR:
sjo04090
]
128371677
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Nectin family
128371677
CD molecules [BR:
sjo04090
]
Proteins
128371677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ig
Ig_3
V-set
I-set
C2-set_3
Ig_2
C2-set_2
V-set_CD47
TMEM154
Orf78
Motif
Other DBs
NCBI-GeneID:
128371677
NCBI-ProteinID:
XP_053188029
LinkDB
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Position
13:complement(29196965..29203302)
Genome browser
AA seq
460 aa
AA seq
DB search
MELKLQLVVFVLFIQGSLAVWQRTVIQGQTLHLNCPITNAHKNNVEWRNPEGQIMFFNRN
KALKDKRYSIDKLSHTEFSVSVSDVTFRDGGNYTCSQYSHPTIEKKVEVTVFGLPKMSKS
NHDGKTIIKCTAEESDRFPQIYWQIDNGHEIHAHHAQTVLEGKKYVTIGMLHVVSSKNRA
IVKCIVRHPSLSSPLMNHVKIGPKKPTAVTSPPTSHPQGSTTTTRWISHGGTTAYLTTRD
EHGPSSESSAMLSTVPSNETVTEPTHVTSTGDVSRTSVFSNTTKTGNESSSNATSTTGWT
YETTEETPFYNDTEGNKTVSANDLEKRTANKGNSSLLVFLVTSLIFALLIVVIFFGIKLR
RAHITWKRVFIVTENEDSVPSEDSNKSKSSHEEKNSQGQRWRGLSNMAFTQYVSEEPKGI
TSVINTGAMTAAERTNIGQTSQPQTQAQTPAISNIKETEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagctgcagctcgtcgtcttcgtgttattcatacagggttcacttgcggtg
tggcagcgtactgtgatacaaggtcagacactccacttaaactgccccattacaaacgct
cacaagaacaatgtggagtggcgtaaccctgaaggacagatcatgtttttcaatcggaat
aaagctttgaaggacaagcggtacagcattgacaaactttcccacactgaattcagtgtc
agtgtttccgatgtcaccttcagagatggaggcaactacacatgctcacagtacagccac
cccacaatagagaagaaagtagaggtgacagtgtttggtctccccaaaatgtcaaaatca
aatcacgatgggaaaactatcatcaaatgcactgctgaagagagcgacagatttccccag
atctactggcaaatagataacgggcatgaaattcatgctcatcatgcccaaactgtactc
gaaggtaaaaagtatgtcaccataggtatgttacatgtcgtgtcttcgaagaacagagcc
atcgtgaaatgcattgttcgacatccatctctgtcctcacccctgatgaaccatgtcaaa
attggaccgaaaaagcccacggccgtgacaagtccacccacatctcaccctcaagggtca
acgacaacgacccgctggatctcacatgggggaacaacagcatatctcacaaccagagat
gagcatgggccttcatcagagagctctgcaatgttatcaactgttccttccaatgagaca
gttacagaacccacacatgtcaccagtactggtgatgtctcaagaacttctgtattttct
aacacaacaaagactggaaatgaaagcagcagtaatgcaacaagcacaacaggttggaca
tatgagacaacagaggagaccccgttctataatgatacagagggaaacaaaacagtgagt
gctaatgacctagagaagcggacagctaataaaggaaactcctcattactggtcttcctc
gtgacaagcctgatcttcgctttgctgattgtggtcattttttttggcatcaagttaaga
agagcacacatcacctggaagagagtgtttattgttacagagaatgaagactctgttcct
tcagaggacagcaacaaatcaaaatcaagccacgaagagaagaactcccaaggacagagg
tggagaggactctccaacatggcattcacacagtatgtctctgaagagccaaaagggata
acttcagtgataaatacaggagcgatgacggcagcagagaggacaaatataggccagact
tctcagcctcaaacccaggcacaaactccagccataagtaacatcaaggagacagaactg
tag
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